RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 SLC6A17Q9H1V8 727 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 ATP13A3Q9H7F0 1226 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 DTLQ9NZJ0 730 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 DKK3Q9UBP4 350 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 SUSD2Q9UGT4 822 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.74□□□□□ -0.69
TMEM260-206ENST00000555046 PTPN13Q12923 2485 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 hCG_1818297A0A087WSY0 165 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 HACD1B0YJ81 288 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 SEMA4FO95754 770 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 CCNB1P14635 433 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 CA4P22748 312 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 SERPINA4P29622 427 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 SCNN1BP51168 640 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 NEK3P51956 506 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 BCL2L1Q07817 233 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 PPIDQ08752 370 aaKnown RBP10.73□□□□□ -0.69
TMEM260-206ENST00000555046 XRCC4Q13426 336 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 BRAT1Q6PJG6 821 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 BBS12Q6ZW61 710 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 CYP2U1Q7Z449 544 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 SRLQ86TD4 932 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 TTC7BQ86TV6 843 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 FAM124AQ86V42 546 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 SYT12Q8IV01 421 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 TMEFF1Q8IYR6 380 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 TEX26Q8N6G2 289 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 TFB1MQ8WVM0 346 aaKnown RBP10.73□□□□□ -0.69
TMEM260-206ENST00000555046 KRT35Q92764 455 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 HES6Q96HZ4 224 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 VAT1Q99536 393 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 TMEM121BQ9BXQ6 578 aaPredicted RBP10.73□□□□□ -0.69
TMEM260-206ENST00000555046 OSBPL8Q9BZF1 889 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 POLR1EQ9GZS1 481 aaKnown RBP10.73□□□□□ -0.69
TMEM260-206ENST00000555046 GOLPH3Q9H4A6 298 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 SUV39H2Q9H5I1 410 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 ZDHHC6Q9H6R6 413 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 PREBQ9HCU5 417 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 VPS45Q9NRW7 570 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 RBM22Q9NW64 420 aaKnown RBP eCLIP10.73□□□□□ -0.69
TMEM260-206ENST00000555046 TRIM10Q9UDY6 481 aa10.73□□□□□ -0.69
TMEM260-206ENST00000555046 MBD1Q9UIS9 605 aaPredicted RBP10.73□□□□□ -0.69
TMEM260-206ENST00000555046 ATG2BQ96BY7 2078 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 BCLAF3A2AJT9 711 aaKnown RBP10.72□□□□□ -0.69
TMEM260-206ENST00000555046 MEI4A8MW99 385 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 APOC4-APOC2K7ER74 178 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 NEMP1O14524 444 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 TSPAN6O43657 245 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 MFSD11O43934 449 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 STK10O94804 968 aaKnown RBP10.72□□□□□ -0.69
TMEM260-206ENST00000555046 EPN2O95208 641 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 FTCDO95954 541 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 APOC2P02655 101 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 BCKDHBP21953 392 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 ACSL1P33121 698 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 CCR5P51681 352 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 DYNLT1P63172 113 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 CREB5Q02930 508 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 GBE1Q04446 702 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 ITKQ08881 620 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 SLC10A7Q0GE19 358 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 AP1B1Q10567 949 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 DUOXA1Q1HG43 343 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 ATXN7L2Q5T6C5 722 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-206ENST00000555046 KIAA0895LQ68EN5 471 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 PRPF39Q86UA1 669 aaKnown RBP10.72□□□□□ -0.69
TMEM260-206ENST00000555046 CACUL1Q86Y37 369 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 RGL4Q8IZJ4 473 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 TSEN2Q8NCE0 465 aaKnown RBP10.72□□□□□ -0.69
TMEM260-206ENST00000555046 CHST14Q8NCH0 376 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 GRIN3AQ8TCU5 1115 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 DNASE2BQ8WZ79 361 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 MAML1Q92585 1016 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 FAM131CQ96AQ9 280 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 KLHL32Q96NJ5 620 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 NUDCD1Q96RS6 583 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 MGME1Q9BQP7 344 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 SCUBE2Q9NQ36 999 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 EVLQ9UI08 416 aaPredicted RBP10.72□□□□□ -0.69
TMEM260-206ENST00000555046 SARDHQ9UL12 918 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 JRKLQ9Y4A0 524 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 ACTL7AQ9Y615 435 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 WASF2Q9Y6W5 498 aa10.72□□□□□ -0.69
TMEM260-206ENST00000555046 CFAP46Q8IYW2 2715 aa10.71□□□□□ -0.69
TMEM260-206ENST00000555046 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.71□□□□□ -0.69
TMEM260-206ENST00000555046 FAM47DPA6NHR8 397 aa10.71□□□□□ -0.69
TMEM260-206ENST00000555046 C16orf96A6NNT2 1141 aa10.71□□□□□ -0.69
TMEM260-206ENST00000555046 KHNYNO15037 678 aaKnown RBP10.71□□□□□ -0.69
TMEM260-206ENST00000555046 INSIG1O15503 277 aa10.71□□□□□ -0.69
TMEM260-206ENST00000555046 PLRG1O43660 514 aaKnown RBP10.71□□□□□ -0.69
TMEM260-206ENST00000555046 AP1G1O43747 822 aa10.71□□□□□ -0.69
TMEM260-206ENST00000555046 KIF5CO60282 957 aa10.71□□□□□ -0.69
TMEM260-206ENST00000555046 RNGTTO60942 597 aaKnown RBP10.71□□□□□ -0.69
TMEM260-206ENST00000555046 ANKRD17O75179 2603 aaKnown RBP10.71□□□□□ -0.69
TMEM260-206ENST00000555046 PEX11BO96011 259 aa10.71□□□□□ -0.69
TMEM260-206ENST00000555046 JCHAINP01591 159 aa10.71□□□□□ -0.69
TMEM260-206ENST00000555046 UGT2B4P06133 528 aa10.71□□□□□ -0.69
TMEM260-206ENST00000555046 CTSLP07711 333 aa10.71□□□□□ -0.69
TMEM260-206ENST00000555046 ZNF806P0C7X5 589 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms