RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 STK40Q8N2I9 435 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 PGBD3Q8N328 593 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 ZNF366Q8N895 744 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 PRELID2Q8N945 189 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 NETO2Q8NC67 525 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 PIP4K2CQ8TBX8 421 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 C1orf54Q8WWF1 131 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 ZNF592Q92610 1267 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 SLCO2A1Q92959 643 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 MS4A14Q96JA4 679 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 CAPZA3Q96KX2 299 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 MRGPRX1Q96LB2 322 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 FCRL5Q96RD9 977 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 SEMA3CQ99985 751 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 TMEM121Q9BTD3 319 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 HDAC8Q9BY41 377 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 MKRN2Q9H000 416 aaKnown RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 PCED1AQ9H1Q7 454 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 TNKS2Q9H2K2 1166 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 PABPC3Q9H361 631 aaKnown RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 SUV39H2Q9H5I1 410 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 USP29Q9HBJ7 922 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 GLOD4Q9HC38 313 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 PCDH9Q9HC56 1237 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 PCYOX1Q9UHG3 505 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 FAM153AQ9UHL3 310 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 RSPH14Q9UHP6 348 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 EVLQ9UI08 416 aaPredicted RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 PPM1HQ9ULR3 514 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 RPL26L1Q9UNX3 145 aaKnown RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 R3HDM2Q9Y2K5 976 aaKnown RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 TTLL3Q9Y4R7 772 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 MRFAP1Q9Y605 127 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 RIF1Q5UIP0 2472 aaKnown RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 LRP4O75096 1905 aa8.15□□□□□ -1.11
LINC01397-201ENST00000554808 ZFHX2Q9C0A1 2572 aaPredicted RBP8.15□□□□□ -1.11
LINC01397-201ENST00000554808 TDRD6O60522 2096 aaKnown RBP8.14□□□□□ -1.11
LINC01397-201ENST00000554808 TSPAN11A1L157 253 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 K7ESF4 209 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 SMAPO00193 183 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 AP3B1O00203 1094 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 KPNA3O00505 521 aaPredicted RBP8.14□□□□□ -1.11
LINC01397-201ENST00000554808 AXIN1O15169 862 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 ZNF185O15231 689 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 HTRA2O43464 458 aaPredicted RBP8.14□□□□□ -1.11
LINC01397-201ENST00000554808 AP1G1O43747 822 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 ECEL1O95672 775 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 EPOP01588 193 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 XPAP23025 273 aaPredicted RBP8.14□□□□□ -1.11
LINC01397-201ENST00000554808 SLC8A1P32418 973 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 NUDT1P36639 197 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 NUMBP49757 651 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 NEK3P51956 506 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 RPS14P62263 151 aaKnown RBP8.14□□□□□ -1.11
LINC01397-201ENST00000554808 CDK16Q00536 496 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 PARP6Q2NL67 630 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 USP39Q53GS9 565 aaKnown RBP8.14□□□□□ -1.11
LINC01397-201ENST00000554808 SPDYCQ5MJ68 293 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 ATXN7L2Q5T6C5 722 aaPredicted RBP8.14□□□□□ -1.11
LINC01397-201ENST00000554808 ARMC12Q5T9G4 340 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 ANO7Q6IWH7 933 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 CCDC70Q6NSX1 233 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 NEK5Q6P3R8 708 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 GDPD4Q6W3E5 623 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 LEKR1Q6ZMV7 388 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 ERN2Q76MJ5 926 aaKnown RBP8.14□□□□□ -1.11
LINC01397-201ENST00000554808 MAATS1Q7Z4T9 603 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 LINC00523Q86TU6 105 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 LONP2Q86WA8 852 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 MMAAQ8IVH4 418 aaKnown RBP8.14□□□□□ -1.11
LINC01397-201ENST00000554808 KLHDC8BQ8IXV7 354 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 RAVER1Q8IY67 606 aaKnown RBP8.14□□□□□ -1.11
LINC01397-201ENST00000554808 PGBD5Q8N414 524 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 PAF1Q8N7H5 531 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 CEP112Q8N8E3 955 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 FAM71DQ8N9W8 422 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 MDGA1Q8NFP4 955 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 GRIN3AQ8TCU5 1115 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 HMGB4Q8WW32 186 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 ATG4AQ8WYN0 398 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 FAM131CQ96AQ9 280 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 ECHDC3Q96DC8 303 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 IMP4Q96G21 291 aaKnown RBP8.14□□□□□ -1.11
LINC01397-201ENST00000554808 EXOC2Q96KP1 924 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 AGAP3Q96P47 875 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 HHIPQ96QV1 700 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 FAM129BQ96TA1 746 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 OMDQ99983 421 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 FSD1LQ9BXM9 530 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 AP1M1Q9BXS5 423 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 ADGRE3Q9BY15 652 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 SGK2Q9HBY8 427 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 ZDHHC4Q9NPG8 344 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 KCTD5Q9NXV2 234 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 USP36Q9P275 1121 aaKnown RBP8.14□□□□□ -1.11
LINC01397-201ENST00000554808 PHTF1Q9UMS5 762 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 PCDHGA2Q9Y5H1 932 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 WASF2Q9Y6W5 498 aa8.14□□□□□ -1.11
LINC01397-201ENST00000554808 GVINP1Q7Z2Y8 2422 aa8.13□□□□□ -1.11
LINC01397-201ENST00000554808 ADAMTS9Q9P2N4 1935 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms