RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 SLC25A28Q96A46 364 aa3.3□□□□□ -1.88
SCFD1-213ENST00000554776 WDFY2Q96P53 400 aa3.3□□□□□ -1.88
SCFD1-213ENST00000554776 IFT27Q9BW83 186 aa3.3□□□□□ -1.88
SCFD1-213ENST00000554776 GLIS2Q9BZE0 524 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-213ENST00000554776 RANBP17Q9H2T7 1088 aaKnown RBP3.3□□□□□ -1.88
SCFD1-213ENST00000554776 EBF3Q9H4W6 596 aa3.3□□□□□ -1.88
SCFD1-213ENST00000554776 DIAPH3Q9NSV4 1193 aa3.3□□□□□ -1.88
SCFD1-213ENST00000554776 C20orf141Q9NUB4 165 aa3.3□□□□□ -1.88
SCFD1-213ENST00000554776 TBC1D29Q9UFV1 150 aa3.3□□□□□ -1.88
SCFD1-213ENST00000554776 CORO1CQ9ULV4 474 aaPredicted RBP3.3□□□□□ -1.88
SCFD1-213ENST00000554776 TTC3P53804 2025 aa3.3□□□□□ -1.88
SCFD1-213ENST00000554776 MST1RQ04912 1400 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 ADGRF5Q8IZF2 1346 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 C17orf113A0A1B0GUU1 675 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 FAM237BA0A1B0GVD1 139 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 A0A1W2PQM1 296 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 TMEM247A6NEH6 219 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 FIBPO43427 364 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 ZC3H11AO75152 810 aaKnown RBP eCLIP3.29□□□□□ -1.88
SCFD1-213ENST00000554776 MLYCDO95822 493 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 SYF2O95926 243 aaKnown RBP3.29□□□□□ -1.88
SCFD1-213ENST00000554776 IFNA2P01563 188 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 UNGP13051 313 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-213ENST00000554776 HOXD13P35453 343 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 ACTN2P35609 894 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 SLC16A2P36021 539 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 ARL3P36405 182 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 MLH1P40692 756 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 ARSFP54793 590 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 TMPRSS3P57727 454 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 CYP4A11Q02928 519 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 GAD2Q05329 585 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 EIF4A2Q14240 407 aaKnown RBP3.29□□□□□ -1.88
SCFD1-213ENST00000554776 RPE65Q16518 533 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 PRTGQ2VWP7 1150 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 SYTL3Q4VX76 610 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 SPATA1Q5VX52 437 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 TMEM268Q5VZI3 342 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 TBC1D9BQ66K14 1250 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 TTI2Q6NXR4 508 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 INO80CQ6PI98 192 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-213ENST00000554776 KLHL24Q6TFL4 600 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 IL20RBQ6UXL0 311 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 ZNF517Q6ZMY9 492 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-213ENST00000554776 RRM2BQ7LG56 351 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 PRSS45Q7RTY3 260 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 TRAPPC11Q7Z392 1133 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 SLC46A3Q7Z3Q1 461 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 TADA2BQ86TJ2 420 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 TRIM74Q86UV6 250 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 TRIM73Q86UV7 250 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 FAM160B2Q86V87 743 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 IGFN1Q86VF2 1251 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 TICAM2Q86XR7 235 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 TDRPQ86YL5 185 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 LURAP1LQ8IV03 231 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 SAMD14Q8IZD0 417 aaPredicted RBP3.29□□□□□ -1.88
SCFD1-213ENST00000554776 PELI3Q8N2H9 469 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 TTC39CQ8N584 583 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 CADM4Q8NFZ8 388 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 CREB3L4Q8TEY5 395 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 HDAC7Q8WUI4 952 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 FAR1Q8WVX9 515 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 INPP5DQ92835 1189 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 SAAL1Q96ER3 474 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 TASP1Q9H6P5 420 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 FZD3Q9NPG1 666 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 ATP8A2Q9NTI2 1148 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 ADD3Q9UEY8 706 aaKnown RBP3.29□□□□□ -1.88
SCFD1-213ENST00000554776 CDH22Q9UJ99 828 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 RABGAP1Q9Y3P9 1069 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 KCNE2Q9Y6J6 123 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 RPS6KL1Q9Y6S9 549 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 CAPN7Q9Y6W3 813 aa3.29□□□□□ -1.88
SCFD1-213ENST00000554776 ARHGAP10A1A4S6 786 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 GAGE12JA6NER3 117 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 PTGES3LE9PB15 166 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 K7ENM7 598 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 LIASO43766 372 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 SERPINC1P01008 464 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 SNHG28P0DPA3 235 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 ACADMP11310 421 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 LAMP2P13473 410 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 HOXB2P14652 356 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 TNFSF8P32971 234 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 DPP6P42658 865 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 RARSP54136 660 aaKnown RBP3.28□□□□□ -1.88
SCFD1-213ENST00000554776 NAP1L1P55209 391 aaKnown RBP3.28□□□□□ -1.88
SCFD1-213ENST00000554776 CEBPZQ03701 1054 aaKnown RBP3.28□□□□□ -1.88
SCFD1-213ENST00000554776 MAMLD1Q13495 774 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 PTGR1Q14914 329 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 CCNG2Q16589 344 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 DAB2IPQ5VWQ8 1189 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 LRRC8EQ6NSJ5 796 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 CDC73Q6P1J9 531 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 CYP20A1Q6UW02 462 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 WDR5BQ86VZ2 330 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 ZDHHC17Q8IUH5 632 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 FAM185AQ8N0U4 392 aa3.28□□□□□ -1.88
SCFD1-213ENST00000554776 ADSSL1Q8N142 457 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms