RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 SMCO2A6NFE2 343 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ZSCAN5BA6NJL1 495 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PER2O15055 1255 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ECI2O75521 394 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ALDH2P05091 517 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ADH1AP07327 375 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CELA3AP09093 270 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 QDPRP09417 244 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 EPCAMP16422 314 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 TGM1P22735 817 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SLC11A1P49279 550 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ALDH7A1P49419 539 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 LIG3P49916 1009 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CCR5P51681 352 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SEC24CP53992 1094 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ATXN3P54252 364 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 NAPAP54920 295 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CASP9P55211 416 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ARL4CP56559 192 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 EIF3EP60228 445 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PRKCEQ02156 737 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CREB5Q02930 508 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 NCBP1Q09161 790 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CCINQ13939 588 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 RCN2Q14257 317 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PDK1Q15118 436 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 NTRK3Q16288 839 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 RTN1Q16799 776 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CCDC14Q49A88 953 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ANO6Q4KMQ2 910 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 RARS2Q5T160 578 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 RNF220Q5VTB9 566 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 HGSNATQ68CP4 663 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CENPPQ6IPU0 288 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 DENND5AQ6IQ26 1287 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ERICH5Q6P6B1 374 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ATG14Q6ZNE5 492 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 DSG4Q86SJ6 1040 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PSTKQ8IV42 348 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SLITRK4Q8IW52 837 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 C4orf19Q8IY42 314 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 FBXW8Q8N3Y1 598 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SLC44A3Q8N4M1 653 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CLRN3Q8NCR9 226 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PIK3C3Q8NEB9 887 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 IFI44Q8TCB0 444 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PRCCQ92733 491 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 HDAC10Q969S8 669 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 HDAC11Q96DB2 347 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF837Q96EG3 531 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CALML4Q96GE6 196 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 TMEM169Q96HH4 297 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 RBM41Q96IZ5 413 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CFAP57Q96MR6 1250 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 TSNARE1Q96NA8 513 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 NR1H4Q96RI1 486 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 OSMRQ99650 979 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 THUMPD3Q9BV44 507 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PARD6BQ9BYG5 372 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 TRIM2Q9C040 744 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PCED1AQ9H1Q7 454 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ST6GALNAC4Q9H4F1 302 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 FANCEQ9HB96 536 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 C6orf50Q9HD87 102 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 KCNMB3Q9NPA1 279 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SLC35D1Q9NTN3 355 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ZFP57Q9NU63 452 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 INTS7Q9NVH2 962 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF358Q9NW07 568 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SENP1Q9P0U3 644 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 FBXW11Q9UKB1 542 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PAIP2BQ9ULR5 123 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PIN4Q9Y237 131 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CBY1Q9Y3M2 126 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PCDHA5Q9Y5H7 936 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 MYO16Q9Y6X6 1858 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 EYSQ5T1H1 3165 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 HELZP42694 1942 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 TICRRQ7Z2Z1 1910 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 A0A1B0GUA9 196 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ARHGEF37A1IGU5 675 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SHISA7A6NL88 538 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 F8W8V4 182 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 H0Y858 1186 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 GOLGA8RI6L899 631 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 MSH4O15457 936 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 FFAR2O15552 330 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 VEGFDO43915 354 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CIDEAO60543 219 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 JAK2O60674 1132 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 N4BP1O75113 896 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 MTX2O75431 263 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CLPTM1O96005 669 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 F13A1P00488 732 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 RETP07949 1114 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CNPP09543 421 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 LAMP2P13473 410 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 IFNAR1P17181 557 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms