RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ARHGAP42A6NI28 874 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 SLC31A1O15431 190 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 DAPK3O43293 454 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 CBFA2T2O43439 604 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 PRAMEF11O60813 436 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 TOP3BO95985 862 aaKnown RBP10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 FAM228BP0C875 321 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 SUOXP51687 545 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 TRIM14Q14142 442 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 DPYSL2Q16555 572 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 CA9Q16790 459 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 BOLA3Q53S33 107 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 SEL1L3Q68CR1 1132 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 UNQ6494/PRO21346Q6UXR6 183 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 GDPD4Q6W3E5 623 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 DCP2Q8IU60 420 aaKnown RBP10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 RYBPQ8N488 228 aaPredicted RBP10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 LZTR1Q8N653 840 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 DENND6BQ8NEG7 585 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 OR6K2Q8NGY2 324 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 HCAR2Q8TDS4 363 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 TEKT4Q8WW24 435 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 GATA6Q92908 595 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 IFT43Q96FT9 208 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 KLHDC7BQ96G42 594 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 LENG8Q96PV6 779 aaPredicted RBP10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 KCTD15Q96SI1 283 aaPredicted RBP10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 C1QTNF2Q9BXJ5 285 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 SLC17A9Q9BYT1 436 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 XPO4Q9C0E2 1151 aaKnown RBP10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 THAP2Q9H0W7 228 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 ZWILCHQ9H900 591 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 GPR27Q9NS67 375 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 TOR4AQ9NXH8 423 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 MYO1AQ9UBC5 1043 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 DKK3Q9UBP4 350 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 LHX3Q9UBR4 397 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 UBA2Q9UBT2 640 aaPredicted RBP10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 FTSJ1Q9UET6 329 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 ZMIZ1Q9ULJ6 1067 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 NENFQ9UMX5 172 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 HS3ST3A1Q9Y663 406 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 GOLGA4Q13439 2230 aaKnown RBP10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 SHROOM3Q8TF72 1996 aa10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 DSPP15924 2871 aaKnown RBP10.55□□□□□ -0.72
PTCD2P1-201ENST00000554393 TSPAN11A1L157 253 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 A6NNZ2 444 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 H3BRJ5 948 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 AREL1O15033 823 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 CYP1A2P05177 515 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 UGT2B4P06133 528 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 ITGAVP06756 1048 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 THEGLP0DJG4 465 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 PRLRP16471 622 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 ERCC2P18074 760 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 SPINK2P20155 84 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 CASP14P31944 242 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 GKP32189 559 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 ABL2P42684 1182 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 CSNK1DP48730 415 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 IL9RQ01113 521 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 DPYSQ14117 519 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 RFTN1Q14699 578 aaPredicted RBP10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 CYTH1Q15438 398 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 PPP6R3Q5H9R7 873 aaPredicted RBP10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 ATXN7L2Q5T6C5 722 aaPredicted RBP10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 SPECC1LQ69YQ0 1117 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 ALKBH5Q6P6C2 394 aaKnown RBP10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 KYAT3Q6YP21 454 aaKnown RBP10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 LEKR1Q6ZMV7 388 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 GCNT7Q6ZNI0 430 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 KANSL1Q7Z3B3 1105 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 SLCO6A1Q86UG4 719 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 ARHGAP12Q8IWW6 846 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 CHCHD4Q8N4Q1 142 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 CPLX3Q8WVH0 158 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 KLHL32Q96NJ5 620 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 TUBGCP5Q96RT8 1024 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 SLC39A8Q9C0K1 460 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 KLHL11Q9NVR0 708 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 CWC15Q9P013 229 aaKnown RBP10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 IP6K2Q9UHH9 426 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 LCMT1Q9UIC8 334 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 KLK13Q9UKR3 277 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 PCDHGA1Q9Y5H4 931 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 KNTC1P50748 2209 aa10.54□□□□□ -0.72
PTCD2P1-201ENST00000554393 NEMP1O14524 444 aa10.53□□□□□ -0.72
PTCD2P1-201ENST00000554393 SPINT1O43278 529 aa10.53□□□□□ -0.72
PTCD2P1-201ENST00000554393 C1SP09871 688 aa10.53□□□□□ -0.72
PTCD2P1-201ENST00000554393 ATXN1LP0C7T5 689 aaKnown RBP10.53□□□□□ -0.72
PTCD2P1-201ENST00000554393 CDK4P11802 303 aa10.53□□□□□ -0.72
PTCD2P1-201ENST00000554393 IL1R2P27930 398 aa10.53□□□□□ -0.72
PTCD2P1-201ENST00000554393 ARL4AP40617 200 aa10.53□□□□□ -0.72
PTCD2P1-201ENST00000554393 RABIFP47224 123 aa10.53□□□□□ -0.72
PTCD2P1-201ENST00000554393 PAPOLAP51003 745 aaKnown RBP10.53□□□□□ -0.72
PTCD2P1-201ENST00000554393 SLC25A11Q02978 314 aaKnown RBP10.53□□□□□ -0.72
PTCD2P1-201ENST00000554393 IL10RBQ08334 325 aa10.53□□□□□ -0.72
PTCD2P1-201ENST00000554393 NSUN2Q08J23 767 aaKnown RBP eCLIP10.53□□□□□ -0.72
PTCD2P1-201ENST00000554393 ELP6Q0PNE2 266 aa10.53□□□□□ -0.72
PTCD2P1-201ENST00000554393 SGCGQ13326 291 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms