RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 INAVAQ3KP66 663 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 TMCO4Q5TGY1 634 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 RHOT2Q8IXI1 618 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 OXR1Q8N573 874 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 FAM71BQ8TC56 605 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 EXOC2Q96KP1 924 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 KLHL32Q96NJ5 620 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 ZNF599Q96NL3 588 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 TUBGCP5Q96RT8 1024 aa13.23□□□□□ -0.29
SHMT2-211ENST00000554310 ELF4Q99607 663 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-211ENST00000554310 CINPQ9BW66 212 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-211ENST00000554310 IPO11Q9UI26 975 aaKnown RBP13.23□□□□□ -0.29
SHMT2-211ENST00000554310 A0A1B0GTQ1 180 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 TSPAN11A1L157 253 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 TLR4O00206 839 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 NEMP1O14524 444 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 PALMO75781 387 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 MTA2O94776 668 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 KRT7P08729 469 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 CCDC175P0C221 793 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 PRLRP16471 622 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 AMPD1P23109 780 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 HSPA9P38646 679 aaKnown RBP13.22□□□□□ -0.29
SHMT2-211ENST00000554310 CSNK1DP48730 415 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 ARRB1P49407 418 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-211ENST00000554310 SUOXP51687 545 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 ETF1P62495 437 aaKnown RBP13.22□□□□□ -0.29
SHMT2-211ENST00000554310 SIM1P81133 766 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-211ENST00000554310 STAT4Q14765 748 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 PDK2Q15119 407 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 SEL1L3Q68CR1 1132 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 RAD9BQ6WBX8 426 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 DBX2Q6ZNG2 339 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 ATPAF2Q8N5M1 289 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 FAM174AQ8TBP5 190 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 HCAR2Q8TDS4 363 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 SETD7Q8WTS6 366 aaKnown RBP13.22□□□□□ -0.29
SHMT2-211ENST00000554310 RFFLQ8WZ73 363 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 FEM1CQ96JP0 617 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 ZNF670Q9BS34 389 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 ERVMER34-1Q9H9K5 563 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 ETNK2Q9NVF9 386 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 SEPT3Q9UH03 358 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 PCOLCE2Q9UKZ9 415 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 INTUQ9ULD6 942 aa13.22□□□□□ -0.29
SHMT2-211ENST00000554310 ZFR2Q9UPR6 939 aaKnown RBP13.22□□□□□ -0.29
SHMT2-211ENST00000554310 COL5A1P20908 1838 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-211ENST00000554310 SPAARA0A1B0GVQ0 90 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 SOWAHDA6NJG2 315 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 AREL1O15033 823 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 SLC31A1O15431 190 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 SPINT1O43278 529 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 CBFA2T3O75081 653 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 SERPINA4P29622 427 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 GJC1P36383 396 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 ARHGAP25P42331 645 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 GRK6P43250 576 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 RENBPP51606 427 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 ARSEP51690 589 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 SHC2P98077 582 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 DPYSL3Q14195 570 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 LBRQ14739 615 aaKnown RBP13.21□□□□□ -0.29
SHMT2-211ENST00000554310 CFAP58Q5T655 872 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 BRAT1Q6PJG6 821 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 ARHGAP36Q6ZRI8 547 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 MAP7D3Q8IWC1 876 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 NETO2Q8NC67 525 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 DENND6BQ8NEG7 585 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 BAHD1Q8TBE0 780 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-211ENST00000554310 SLC35G2Q8TBE7 412 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 ASB12Q8WXK4 309 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 ZNF641Q96N77 438 aaPredicted RBP13.21□□□□□ -0.29
SHMT2-211ENST00000554310 PSKH2Q96QS6 385 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 ATP13A3Q9H7F0 1226 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 ANGPTL2Q9UKU9 493 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 PCDHB9Q9Y5E1 797 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 ADGRG1Q9Y653 693 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 SHROOM3Q8TF72 1996 aa13.21□□□□□ -0.29
SHMT2-211ENST00000554310 A6NNZ2 444 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 TMEM110-MUSTN1A8MSY1 372 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 KCNK3O14649 394 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 INSIG1O15503 277 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 CTIFO43310 598 aaKnown RBP13.2□□□□□ -0.3
SHMT2-211ENST00000554310 PIGNO95427 931 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 XPAP23025 273 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-211ENST00000554310 IL4RP24394 825 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 EPHA8P29322 1005 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-211ENST00000554310 RGRP47804 291 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 AP1S1P61966 158 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 NSUN2Q08J23 767 aaKnown RBP eCLIP13.2□□□□□ -0.3
SHMT2-211ENST00000554310 ELP6Q0PNE2 266 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 SGCGQ13326 291 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 ZNF235Q14590 738 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 TCEAL1Q15170 157 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 TRIP6Q15654 476 aaKnown RBP13.2□□□□□ -0.3
SHMT2-211ENST00000554310 KYAT3Q6YP21 454 aaKnown RBP13.2□□□□□ -0.3
SHMT2-211ENST00000554310 GCNT7Q6ZNI0 430 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 ABI3BPQ7Z7G0 1075 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 GLRX5Q86SX6 157 aa13.2□□□□□ -0.3
SHMT2-211ENST00000554310 SRLQ86TD4 932 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms