RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 GYPCP04921 128 aa17.19■□□□□ 0.34
NEK9-204ENST00000554258 CDC25BP30305 580 aa17.19■□□□□ 0.34
NEK9-204ENST00000554258 CLCN1P35523 988 aa17.19■□□□□ 0.34
NEK9-204ENST00000554258 NUMBP49757 651 aa17.19■□□□□ 0.34
NEK9-204ENST00000554258 ZFP36L1Q07352 338 aaKnown RBP17.19■□□□□ 0.34
NEK9-204ENST00000554258 TMEM270Q6UE05 265 aa17.19■□□□□ 0.34
NEK9-204ENST00000554258 ARL10Q8N8L6 244 aa17.19■□□□□ 0.34
NEK9-204ENST00000554258 FRS2Q8WU20 508 aa17.19■□□□□ 0.34
NEK9-204ENST00000554258 NDRG1Q92597 394 aaKnown RBP17.19■□□□□ 0.34
NEK9-204ENST00000554258 EDEM1Q92611 657 aa17.19■□□□□ 0.34
NEK9-204ENST00000554258 TCEAL2Q9H3H9 227 aaPredicted RBP17.19■□□□□ 0.34
NEK9-204ENST00000554258 NLRC4Q9NPP4 1024 aa17.19■□□□□ 0.34
NEK9-204ENST00000554258 SIRPGQ9P1W8 387 aa17.19■□□□□ 0.34
NEK9-204ENST00000554258 GGT7Q9UJ14 662 aa17.19■□□□□ 0.34
NEK9-204ENST00000554258 ZFR2Q9UPR6 939 aaKnown RBP17.19■□□□□ 0.34
NEK9-204ENST00000554258 YY2O15391 372 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 CAPN5O15484 640 aaPredicted RBP17.18■□□□□ 0.34
NEK9-204ENST00000554258 ACSL4O60488 711 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 ITGB7P26010 798 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 SOX5P35711 763 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 STAT1P42224 750 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 CCDC15Q0P6D6 951 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 EIF2B5Q13144 721 aaKnown RBP17.18■□□□□ 0.34
NEK9-204ENST00000554258 RAPGEF1Q13905 1077 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 TRIM14Q14142 442 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 DEFB109BQ30KR1 87 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 ACCSLQ4AC99 568 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 ARHGAP17Q68EM7 881 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 KYQ8NBH2 561 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 DNAI2Q9GZS0 605 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 CDH19Q9H159 772 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 AIPL1Q9NZN9 384 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 DOLKQ9UPQ8 538 aa17.18■□□□□ 0.34
NEK9-204ENST00000554258 NIPBLQ6KC79 2804 aaeCLIP17.17■□□□□ 0.34
NEK9-204ENST00000554258 ALOX15BO15296 676 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 LUC7L3O95232 432 aaKnown RBP17.17■□□□□ 0.34
NEK9-204ENST00000554258 ZBED1O96006 694 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 VDRP11473 427 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 TKTL1P51854 596 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 BPIFB4P59827 614 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 ZBED6P86452 979 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 CDC20Q12834 499 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 ZNF394Q53GI3 561 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 TPRG1LQ5T0D9 272 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 PHF19Q5T6S3 580 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 PPP1R26Q5T8A7 1209 aaPredicted RBP17.17■□□□□ 0.34
NEK9-204ENST00000554258 PIGZQ86VD9 579 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 UNC45BQ8IWX7 931 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 CACNA2D3Q8IZS8 1091 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 CFAP52Q8N1V2 620 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 SYN2Q92777 582 aaPredicted RBP17.17■□□□□ 0.34
NEK9-204ENST00000554258 MYEOVQ96EZ4 313 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 POM121Q96HA1 1249 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 SLC45A3Q96JT2 553 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 DDX50Q9BQ39 737 aaKnown RBP17.17■□□□□ 0.34
NEK9-204ENST00000554258 ZSWIM1Q9BR11 485 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 LRRC61Q9BV99 259 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 ULBP1Q9BZM6 244 aa17.17■□□□□ 0.34
NEK9-204ENST00000554258 NUCKS1Q9H1E3 243 aaKnown RBP17.17■□□□□ 0.34
NEK9-204ENST00000554258 AKAP7Q9P0M2 348 aaPredicted RBP17.17■□□□□ 0.34
NEK9-204ENST00000554258 ZNF106Q9H2Y7 1883 aaKnown RBP17.16■□□□□ 0.34
NEK9-204ENST00000554258 K7EM74 188 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 MCF2LO15068 1137 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 SPINT1O43278 529 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 DUX1O43812 170 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 BNIP3LO60238 219 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 PAK4O96013 591 aaPredicted RBP17.16■□□□□ 0.34
NEK9-204ENST00000554258 PNMA6AP0CW24 399 aaPredicted RBP17.16■□□□□ 0.34
NEK9-204ENST00000554258 KRT5P13647 590 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 HNRNPH3P31942 346 aaKnown RBP17.16■□□□□ 0.34
NEK9-204ENST00000554258 UGT1A3P35503 534 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 CNGA2Q16280 664 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 EIF2S3LQ2VIR3 472 aaKnown RBP17.16■□□□□ 0.34
NEK9-204ENST00000554258 TMEM259Q4ZIN3 620 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 RAB41Q5JT25 222 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 PM20D1Q6GTS8 502 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 NADSYN1Q6IA69 706 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 ASB18Q6ZVZ8 466 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 IRF2BP2Q7Z5L9 587 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 CCNJLQ8IV13 435 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 PHACTR4Q8IZ21 702 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 SLC34A3Q8N130 599 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 Q8N9G6 341 aaPredicted RBP17.16■□□□□ 0.34
NEK9-204ENST00000554258 SCG3Q8WXD2 468 aaKnown RBP17.16■□□□□ 0.34
NEK9-204ENST00000554258 TFAP2BQ92481 460 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 SLC17A9Q9BYT1 436 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 SLC13A1Q9BZW2 595 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 DYRK4Q9NR20 520 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 LUC7L2Q9Y383 392 aaKnown RBP17.16■□□□□ 0.34
NEK9-204ENST00000554258 RNF215Q9Y6U7 377 aa17.16■□□□□ 0.34
NEK9-204ENST00000554258 MKRN2OSH3BPM6 223 aa17.15■□□□□ 0.34
NEK9-204ENST00000554258 KPNA3O00505 521 aaPredicted RBP17.15■□□□□ 0.34
NEK9-204ENST00000554258 FPGTO14772 594 aa17.15■□□□□ 0.34
NEK9-204ENST00000554258 RAD51BO15315 384 aa17.15■□□□□ 0.34
NEK9-204ENST00000554258 TSHRP16473 764 aa17.15■□□□□ 0.34
NEK9-204ENST00000554258 CASP14P31944 242 aa17.15■□□□□ 0.34
NEK9-204ENST00000554258 RECQLP46063 649 aaPredicted RBP17.15■□□□□ 0.34
NEK9-204ENST00000554258 PTK2Q05397 1052 aa17.15■□□□□ 0.34
NEK9-204ENST00000554258 SULT2A1Q06520 285 aa17.15■□□□□ 0.34
NEK9-204ENST00000554258 MEA1Q16626 185 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms