RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SECISBP2LQ93073 1101 aaKnown RBP3.38□□□□□ -1.87
SLIRP-202ENST00000553981 GTF3C6Q969F1 213 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 SENP8Q96LD8 212 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 UROC1Q96N76 676 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 NTPCRQ9BSD7 190 aaKnown RBP3.38□□□□□ -1.87
SLIRP-202ENST00000553981 C2orf40Q9H1Z8 148 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 ECT2Q9H8V3 914 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 IL21RQ9HBE5 538 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 VPS45Q9NRW7 570 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 BLOC1S4Q9NUP1 217 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 DDX19AQ9NUU7 478 aaKnown RBP3.38□□□□□ -1.87
SLIRP-202ENST00000553981 SPTLC3Q9NUV7 552 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 OBP2AQ9NY56 170 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 CPSF3Q9UKF6 684 aaKnown RBP3.38□□□□□ -1.87
SLIRP-202ENST00000553981 RAB23Q9ULC3 237 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 PCDHGA5Q9Y5G8 931 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 PI4KAP42356 2102 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 PHLPP2Q6ZVD8 1323 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 FRYQ5TBA9 3013 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 CACNA1EQ15878 2313 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 EPG5Q9HCE0 2579 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 BAHCC1Q9P281 2608 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 CELSR3Q9NYQ7 3312 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 ARHGEF35A5YM69 484 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 DRGXA6NNA5 263 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 KRTAP29-1A8MX34 341 aaPredicted RBP3.37□□□□□ -1.87
SLIRP-202ENST00000553981 H7C4K7 107 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 PYCARD-AS1I3L0S3 204 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 CPLX1O14810 134 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 CBFA2T3O75081 653 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 BAG4O95429 457 aaKnown RBP3.37□□□□□ -1.87
SLIRP-202ENST00000553981 IGLV2-14P01704 120 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 ERBB2P04626 1255 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 ELANEP08246 267 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 OR52Z1P0C646 297 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 CCDC192P0DO97 292 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 CEACAM1P13688 526 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 ENGP17813 658 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 TYMPP19971 482 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 CSRP1P21291 193 aaKnown RBP3.37□□□□□ -1.87
SLIRP-202ENST00000553981 CYP2F1P24903 491 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 LMO2P25791 158 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 LSP1P33241 339 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 CCT6AP40227 531 aaKnown RBP3.37□□□□□ -1.87
SLIRP-202ENST00000553981 P2RY2P41231 377 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 ACOT2P49753 483 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 DGKEP52429 567 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 CHN2P52757 468 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 NCBP1Q09161 790 aaKnown RBP3.37□□□□□ -1.87
SLIRP-202ENST00000553981 DMP1Q13316 513 aaPredicted RBP3.37□□□□□ -1.87
SLIRP-202ENST00000553981 ZNF169Q14929 603 aaPredicted RBP3.37□□□□□ -1.87
SLIRP-202ENST00000553981 TERF2Q15554 542 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 ITPRIPL2Q3MIP1 535 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 MGAT5BQ3V5L5 792 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 PRAMEF14Q5SWL7 426 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 HYIQ5T013 277 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 AGAP9Q5VTM2 703 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 ARMC6Q6NXE6 501 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 PDXDC1Q6P996 788 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 SYT13Q7L8C5 426 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 EXOC8Q8IYI6 725 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 HACE1Q8IYU2 909 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 SYNPOQ8N3V7 929 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 ARL14EPQ8N8R7 260 aaPredicted RBP3.37□□□□□ -1.87
SLIRP-202ENST00000553981 IL17RCQ8NAC3 791 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 OR14C36Q8NHC7 312 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 ZFP28Q8NHY6 868 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 SLC35B2Q8TB61 432 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 PIGKQ92643 395 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 CD101Q93033 1021 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 ACOX2Q99424 681 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 SEPT5Q99719 369 aaPredicted RBP3.37□□□□□ -1.87
SLIRP-202ENST00000553981 P2RY13Q9BPV8 354 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 ADPGKQ9BRR6 497 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 PI4K2AQ9BTU6 479 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 CCDC94Q9BW85 323 aaPredicted RBP3.37□□□□□ -1.87
SLIRP-202ENST00000553981 STRA6Q9BX79 667 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 KMT5AQ9NQR1 393 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 SIX4Q9UIU6 781 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 PILRBQ9UKJ0 227 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 L1RE1Q9UN81 338 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 CYP46A1Q9Y6A2 500 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 GON4LQ3T8J9 2241 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 PTPRJQ12913 1337 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 TMEM131Q92545 1883 aa3.37□□□□□ -1.87
SLIRP-202ENST00000553981 SMG1Q96Q15 3661 aaKnown RBP3.37□□□□□ -1.87
SLIRP-202ENST00000553981 FRYLO94915 3013 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 LAMA5O15230 3695 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 A0A0B4J269 797 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 A0A1W2PQF6 199 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 OR6C75A6NL08 312 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 KCNJ18B7U540 433 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 WASH3PC4AMC7 463 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 CYB561D2O14569 222 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 MGST3O14880 152 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 TRAPPC3O43617 180 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 SH3BP5O60239 455 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 MARCH6O60337 910 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 TOM1L1O75674 476 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 AKAP3O75969 853 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms