RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ITPR3Q14573 2671 aa9.2□□□□□ -0.94
PRKCH-208ENST00000553846 CXorf51AA0A1B0GTR3 108 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 MTSS1O43312 755 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 KRT38O76015 456 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 ENDOD1O94919 500 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 ADCY5O95622 1261 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 RHOCP08134 193 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 ALPIP09923 528 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 FGF3P11487 239 aaPredicted RBP9.19□□□□□ -0.94
PRKCH-208ENST00000553846 GLB1P16278 677 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 NOS2P35228 1153 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 UGT1A3P35503 534 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 UQCRFS1P47985 274 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 FMO5P49326 533 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 PEX5P50542 639 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 THOP1P52888 689 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 SGCGQ13326 291 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 MTA1Q13330 715 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 ELOCQ15369 112 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 ARHGAP44Q17R89 818 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 COBLL1Q53SF7 1204 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 ZNF805Q5CZA5 627 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 CARD16Q5EG05 197 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 FAXCQ5TGI0 409 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 VPS36Q86VN1 386 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 TICAM1Q8IUC6 712 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 DEFB106AQ8N104 65 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 WDTC1Q8N5D0 677 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 C9orf43Q8TAL5 461 aaPredicted RBP9.19□□□□□ -0.94
PRKCH-208ENST00000553846 JPH3Q8WXH2 748 aaPredicted RBP9.19□□□□□ -0.94
PRKCH-208ENST00000553846 NT5C3BQ969T7 300 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 TSACCQ96A04 125 aaPredicted RBP9.19□□□□□ -0.94
PRKCH-208ENST00000553846 ISG20Q96AZ6 181 aaKnown RBP9.19□□□□□ -0.94
PRKCH-208ENST00000553846 PDXPQ96GD0 296 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 SLC45A3Q96JT2 553 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 MED15Q96RN5 788 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 CPXM1Q96SM3 734 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 METTL14Q9HCE5 456 aaKnown RBP9.19□□□□□ -0.94
PRKCH-208ENST00000553846 LRRC4CQ9HCJ2 640 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 ST7Q9NRC1 585 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 WDR70Q9NW82 654 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 SLC12A6Q9UHW9 1150 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 FCF1Q9Y324 198 aaKnown RBP9.19□□□□□ -0.94
PRKCH-208ENST00000553846 PCDHB11Q9Y5F2 797 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 DGKBQ9Y6T7 804 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 F8P00451 2351 aa9.19□□□□□ -0.94
PRKCH-208ENST00000553846 A0A1B0GVL5 298 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 ILVBLA1L0T0 632 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 K7EM74 188 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 M0QYT0 321 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 HGSO14964 777 aaPredicted RBP9.18□□□□□ -0.94
PRKCH-208ENST00000553846 CETN3O15182 167 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 B4GAT1O43505 415 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 NUDT21O43809 227 aaKnown RBP9.18□□□□□ -0.94
PRKCH-208ENST00000553846 DUX1O43812 170 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 HSF2BPO75031 334 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 POU3F2P20265 443 aaPredicted RBP9.18□□□□□ -0.94
PRKCH-208ENST00000553846 CMA1P23946 247 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 OAS2P29728 719 aaKnown RBP9.18□□□□□ -0.94
PRKCH-208ENST00000553846 CXCR3P49682 368 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 MAPK10P53779 464 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 CDK17Q00537 523 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 SLC20A2Q08357 652 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 NFATC4Q14934 902 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 TCEA2Q15560 299 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 WSCD2Q2TBF2 565 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 TCERG1LQ5VWI1 586 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 CAPRIN2Q6IMN6 1127 aaKnown RBP9.18□□□□□ -0.94
PRKCH-208ENST00000553846 ZNF783Q6ZMS7 281 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 BNIPLQ7Z465 357 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 TFAP2DQ7Z6R9 452 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 HID1Q8IV36 788 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 PPM1KQ8N3J5 372 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 BMPERQ8N8U9 685 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 Q8N9G6 341 aaPredicted RBP9.18□□□□□ -0.94
PRKCH-208ENST00000553846 OR6K2Q8NGY2 324 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 GPBAR1Q8TDU6 330 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 ABHD17AQ96GS6 310 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 NT5C1BQ96P26 610 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 CATSPER2Q96P56 530 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 NPY6RQ99463 290 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 NUDT22Q9BRQ3 303 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 ACP6Q9NPH0 428 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 ZNF71Q9NQZ8 489 aaPredicted RBP9.18□□□□□ -0.94
PRKCH-208ENST00000553846 TMPRSS4Q9NRS4 437 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 MPP6Q9NZW5 540 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 NEU3Q9UQ49 428 aa9.18□□□□□ -0.94
PRKCH-208ENST00000553846 SYNJ2BP-COX16A0A087WUM0 186 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 IGHV5-10-1A0A0J9YXX1 117 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 PRR19A6NJB7 356 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 AGRPO00253 132 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 NKX2-8O15522 239 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 MMP20O60882 483 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 DAB1O75553 588 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 RASGRP1O95267 797 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 NEFLP07196 543 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 ITIH2P19823 946 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 BLKP51451 505 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 NDUFA8P51970 172 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 SRP54P61011 504 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms