RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 RBM41Q96IZ5 413 aaKnown RBP18.67■□□□□ 0.58
CPSF2-202ENST00000553427 MAK16Q9BXY0 300 aaKnown RBP18.67■□□□□ 0.58
CPSF2-202ENST00000553427 SUV39H2Q9H5I1 410 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 EBF2Q9HAK2 575 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 TMEM9BQ9NQ34 198 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 ADGRG1Q9Y653 693 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 SLCO1B1Q9Y6L6 691 aa18.67■□□□□ 0.58
CPSF2-202ENST00000553427 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.66■□□□□ 0.58
CPSF2-202ENST00000553427 A0A1W2PQU0 124 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 GRID2IPA4D2P6 1211 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 CDX4O14627 284 aaPredicted RBP18.66■□□□□ 0.58
CPSF2-202ENST00000553427 MATN3O15232 486 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 SPINT1O43278 529 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 RNGTTO60942 597 aaKnown RBP18.66■□□□□ 0.58
CPSF2-202ENST00000553427 ZRANB2O95218 330 aaKnown RBP eCLIP18.66■□□□□ 0.58
CPSF2-202ENST00000553427 TNNT1P13805 278 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 CTNNA2P26232 953 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 SERPINA4P29622 427 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 MMP13P45452 471 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 PPIDQ08752 370 aaKnown RBP18.66■□□□□ 0.58
CPSF2-202ENST00000553427 GRIK2Q13002 908 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 TFDP2Q14188 446 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 PPP2R5EQ16537 467 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 ZNF284Q2VY69 593 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 ALG1LQ6GMV1 187 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 NAPEPLDQ6IQ20 393 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 SPOCD1Q6ZMY3 1216 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 RCOR2Q8IZ40 523 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 KIAA1524Q8TCG1 905 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 KRT35Q92764 455 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 RNF25Q96BH1 459 aaPredicted RBP18.66■□□□□ 0.58
CPSF2-202ENST00000553427 RMDN1Q96DB5 314 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 OLFM3Q96PB7 478 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 NUDCD1Q96RS6 583 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 RTKNQ9BST9 563 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 BRD8Q9H0E9 1235 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 HAUS2Q9NVX0 235 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 PCDHA3Q9Y5H8 950 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 DCHS1Q96JQ0 3298 aa18.66■□□□□ 0.58
CPSF2-202ENST00000553427 CCDC66A2RUB6 948 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 VILLO15195 856 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 SOCS5O75159 536 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 PIGNO95427 931 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 MARCKSL1P49006 195 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 NR2C2P49116 596 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 NAP1L1P55209 391 aaKnown RBP18.65■□□□□ 0.58
CPSF2-202ENST00000553427 RPS21P63220 83 aaKnown RBP18.65■□□□□ 0.58
CPSF2-202ENST00000553427 PUM1Q14671 1186 aaKnown RBP eCLIP18.65■□□□□ 0.58
CPSF2-202ENST00000553427 PDK1Q15118 436 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 TFDP3Q5H9I0 405 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 IL27RAQ6UWB1 636 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 RFX6Q8HWS3 928 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 LRRC8AQ8IWT6 810 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 SYCE1Q8N0S2 351 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 PGBD5Q8N414 524 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 RNF10Q8N5U6 811 aaKnown RBP18.65■□□□□ 0.58
CPSF2-202ENST00000553427 ASB12Q8WXK4 309 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 SLC6A18Q96N87 628 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 TSGA10Q9BZW7 698 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 ZFR2Q9UPR6 939 aaKnown RBP18.65■□□□□ 0.58
CPSF2-202ENST00000553427 CACNA1AO00555 2505 aa18.65■□□□□ 0.58
CPSF2-202ENST00000553427 hCG_1818297A0A087WSY0 165 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 A0A1W2PQ67 120 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 A0A1W2PR77 199 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 UPK3BL1B0FP48 263 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 UPK3BL2E5RIL1 263 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 PRAMEF26H0Y7S4 382 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 PCDH8O95206 1070 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 TIMP2P16035 220 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 TGM2P21980 687 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 PTPN7P35236 360 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 ID4P47928 161 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 SCNN1BP51168 640 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 COPS2P61201 443 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 BNC1Q01954 994 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 BCL2L1Q07817 233 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 OVGP1Q12889 678 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 ZNF662Q6ZS27 426 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 BZW1Q7L1Q6 419 aaKnown RBP18.64■□□□□ 0.57
CPSF2-202ENST00000553427 IQCHQ86VS3 1027 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 CAMK1DQ8IU85 385 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 CCDC13Q8IYE1 715 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 TMEM145Q8NBT3 493 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 UBE2Q2Q8WVN8 375 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 FEM1CQ96JP0 617 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 SERAC1Q96JX3 654 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 DNAAF2Q9NVR5 837 aaKnown RBP18.64■□□□□ 0.57
CPSF2-202ENST00000553427 EFR3BQ9Y2G0 817 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 HEY1Q9Y5J3 304 aa18.64■□□□□ 0.57
CPSF2-202ENST00000553427 DNAH14Q0VDD8 3507 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 MACROD2A1Z1Q3 448 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 TRAFD1O14545 582 aaPredicted RBP18.63■□□□□ 0.57
CPSF2-202ENST00000553427 TM4SF5O14894 197 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 PPP1R12AO14974 1030 aaPredicted RBP18.63■□□□□ 0.57
CPSF2-202ENST00000553427 HTRA2O43464 458 aaPredicted RBP18.63■□□□□ 0.57
CPSF2-202ENST00000553427 MAP3K6O95382 1288 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 CES1P23141 567 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 CD38P28907 300 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 MAT2AP31153 395 aaKnown RBP18.63■□□□□ 0.57
CPSF2-202ENST00000553427 CSNK1EP49674 416 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms