RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 ISG20Q96AZ6 181 aaKnown RBP9.21□□□□□ -0.94
SYNE2-209ENST00000553308 TIGD1Q96MW7 591 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 KLHL32Q96NJ5 620 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 EPAS1Q99814 870 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 CPEB1Q9BZB8 566 aaKnown RBP9.21□□□□□ -0.94
SYNE2-209ENST00000553308 ZYG11BQ9C0D3 744 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 STRADBQ9C0K7 418 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 NDFIP2Q9NV92 336 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 APEX2Q9UBZ4 518 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 HOOK1Q9UJC3 728 aaKnown RBP9.21□□□□□ -0.94
SYNE2-209ENST00000553308 DOLKQ9UPQ8 538 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 PAXBP1Q9Y5B6 917 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 PCDHGA4Q9Y5G9 962 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 LRP4O75096 1905 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 PRAMEF33A0A0G2JMD5 474 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 SUV39H1O43463 412 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 PRAMEF10O60809 474 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 TM7SF2O76062 418 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 GSRP00390 522 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 F9P00740 461 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 JMJD7P0C870 316 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 LIPCP11150 499 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 WT1P19544 449 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-209ENST00000553308 CCKBRP32239 447 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 CLCN1P35523 988 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 KRT9P35527 623 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 ETV5P41161 510 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 HK3P52790 923 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 SNX16P57768 344 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 YPEL5P62699 121 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 CYP4F2P78329 520 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 PTK2Q05397 1052 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 MORC3Q14149 939 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 KLHL40Q2TBA0 621 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 RAB6CQ53S08 254 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 C2CD6Q53TS8 623 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 KCTD16Q68DU8 428 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 TTC7BQ86TV6 843 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 ZFAND4Q86XD8 727 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 ZDHHC17Q8IUH5 632 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 HID1Q8IV36 788 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 PLPP6Q8IY26 295 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 FSTL5Q8N475 847 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-209ENST00000553308 OR2AP1Q8NGE2 309 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 CXorf40AQ8TE69 158 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 HTR3CQ8WXA8 447 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 ARHGEF2Q92974 986 aaKnown RBP9.2□□□□□ -0.94
SYNE2-209ENST00000553308 TSACCQ96A04 125 aaPredicted RBP9.2□□□□□ -0.94
SYNE2-209ENST00000553308 ARHGEF26Q96DR7 871 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 FAM81BQ96LP2 452 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 CFAP57Q96MR6 1250 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 HAPLN3Q96S86 360 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 WRAP53Q9BUR4 548 aaKnown RBP9.2□□□□□ -0.94
SYNE2-209ENST00000553308 EDEM3Q9BZQ6 932 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 RAB6CQ9H0N0 254 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 LRRN3Q9H3W5 708 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 SIX2Q9NPC8 291 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 FOXJ2Q9P0K8 574 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 GPR34Q9UPC5 381 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 COQ6Q9Y2Z9 468 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 LOXL2Q9Y4K0 774 aa9.2□□□□□ -0.94
SYNE2-209ENST00000553308 PIEZO2Q9H5I5 2752 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 GOLGA8SH3BPF8 625 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 NVLO15381 856 aaKnown RBP9.19□□□□□ -0.94
SYNE2-209ENST00000553308 ALPIP09923 528 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 CTSEP14091 401 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 PON1P27169 355 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 SCNN1AP37088 669 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 SNRPD1P62314 119 aaKnown RBP9.19□□□□□ -0.94
SYNE2-209ENST00000553308 POLD3Q15054 466 aaPredicted RBP9.19□□□□□ -0.94
SYNE2-209ENST00000553308 ELOCQ15369 112 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 TBR1Q16650 682 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 EXOC3L4Q17RC7 722 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 MYLK3Q32MK0 819 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 MANEAQ5SRI9 462 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 ACBD5Q5T8D3 534 aaPredicted RBP9.19□□□□□ -0.94
SYNE2-209ENST00000553308 MANEALQ5VSG8 457 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 LVRNQ6Q4G3 990 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 ENPP7Q6UWV6 458 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 XKR5Q6UX68 686 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 GDPD4Q6W3E5 623 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 GBP6Q6ZN66 633 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 RD3Q7Z3Z2 195 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 BNIPLQ7Z465 357 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 NLRP14Q86W24 1093 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 XYLT1Q86Y38 959 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 CREBRFQ8IUR6 639 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 CCNJLQ8IV13 435 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 SFTPA2Q8IWL1 248 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 Q8N9G6 341 aaPredicted RBP9.19□□□□□ -0.94
SYNE2-209ENST00000553308 NETO2Q8NC67 525 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 SCG3Q8WXD2 468 aaKnown RBP9.19□□□□□ -0.94
SYNE2-209ENST00000553308 TMEM74Q96NL1 305 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 C1QTNF7Q9BXJ2 289 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 OSBPL1AQ9BXW6 950 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 PPARGC1AQ9UBK2 798 aaKnown RBP9.19□□□□□ -0.94
SYNE2-209ENST00000553308 DNAI1Q9UI46 699 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 DNAJC12Q9UKB3 198 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 NEU3Q9UQ49 428 aa9.19□□□□□ -0.94
SYNE2-209ENST00000553308 CHD5Q8TDI0 1954 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms