RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	IRF2BP2	Q7Z5L9	587 aa		11.64	□□□□□ -0.55
TUBA1B-208	ENST00000552984	PLPP6	Q8IY26	295 aa		11.64	□□□□□ -0.55
TUBA1B-208	ENST00000552984	ARFGAP1	Q8N6T3	406 aa		11.64	□□□□□ -0.55
TUBA1B-208	ENST00000552984	DCBLD1	Q8N8Z6	715 aa		11.64	□□□□□ -0.55
TUBA1B-208	ENST00000552984	LMX1A	Q8TE12	382 aa		11.64	□□□□□ -0.55
TUBA1B-208	ENST00000552984	RAB7B	Q96AH8	199 aa		11.64	□□□□□ -0.55
TUBA1B-208	ENST00000552984	EPAS1	Q99814	870 aa		11.64	□□□□□ -0.55
TUBA1B-208	ENST00000552984	CNPY3	Q9BT09	278 aa		11.64	□□□□□ -0.55
TUBA1B-208	ENST00000552984	TTYH3	Q9C0H2	523 aa		11.64	□□□□□ -0.55
TUBA1B-208	ENST00000552984	MBNL1	Q9NR56	388 aa	Known RBP	11.64	□□□□□ -0.55
TUBA1B-208	ENST00000552984	IPO11	Q9UI26	975 aa	Known RBP	11.64	□□□□□ -0.55
TUBA1B-208	ENST00000552984	MGA	Q8IWI9	3026 aa		11.64	□□□□□ -0.55
TUBA1B-208	ENST00000552984	LRRC10B	A6NIK2	292 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	LRRC53	A6NM62	1247 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	AQP9	O43315	295 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	OPA1	O60313	960 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	GCAT	O75600	419 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	CSF2	P04141	144 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	CDK4	P11802	303 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	TIMP2	P16035	220 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	FER	P16591	822 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	EIF2S3	P41091	472 aa	Known RBP	11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	ABCG1	P45844	678 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	TPI1	P60174	286 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	RTP5	Q14D33	572 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	IRF4	Q15306	451 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	HS1BP3	Q53T59	392 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	CCDC183	Q5T5S1	534 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	CDCP2	Q5VXM1	449 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	GUSBP11	Q6P575	273 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	ARHGAP36	Q6ZRI8	547 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	TTC7B	Q86TV6	843 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	ZSWIM9	Q86XI8	627 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	TP53INP2	Q8IXH6	220 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	DENND6B	Q8NEG7	585 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	IFI44	Q8TCB0	444 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	CENPT	Q96BT3	561 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	IFT43	Q96FT9	208 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	LENG8	Q96PV6	779 aa	Predicted RBP	11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	KCTD15	Q96SI1	283 aa	Predicted RBP	11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	SNRNP25	Q9BV90	132 aa	Known RBP	11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	OSBPL1A	Q9BXW6	950 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	NRSN2	Q9GZP1	204 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	LRRC19	Q9H756	370 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	PDF	Q9HBH1	243 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	UBA2	Q9UBT2	640 aa	Predicted RBP	11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	PCSK1N	Q9UHG2	260 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	AP4E1	Q9UPM8	1137 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	RAI2	Q9Y5P3	530 aa		11.63	□□□□□ -0.55
TUBA1B-208	ENST00000552984	CXorf51A	A0A1B0GTR3	108 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	CPED1	A4D0V7	1026 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	PMS2P1	A4D2B8	440 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	ANKRD62	A6NC57	917 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	WASH4P	A8MWX3	477 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	CS	O75390	466 aa	Known RBP	11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	TM7SF2	O76062	418 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	MPO	P05164	745 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	ALPPL2	P10696	532 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	TNFAIP3	P21580	790 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	TGM2	P21980	687 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	PSMA2	P25787	234 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	YBEY	P58557	167 aa	Predicted RBP	11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	MAMLD1	Q13495	774 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	KLHL40	Q2TBA0	621 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	PARP15	Q460N3	678 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	PRRT3	Q5FWE3	981 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	PERM1	Q5SV97	790 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	KCTD16	Q68DU8	428 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	DCP2	Q8IU60	420 aa	Known RBP	11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	PHACTR4	Q8IZ21	702 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	UMODL1-AS1	Q8N2C9	162 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	NPW	Q8N729	165 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	FAM181A	Q8N9Y4	354 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	CXorf40A	Q8TE69	158 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	NCAPG	Q9BPX3	1015 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	LRRC61	Q9BV99	259 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	SLC39A8	Q9C0K1	460 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	DHX35	Q9H5Z1	703 aa	Known RBP	11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	RETREG1	Q9H6L5	497 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	CATSPERB	Q9H7T0	1116 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	APOBEC3B	Q9UH17	382 aa	Known RBP	11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984	MFHAS1	Q9Y4C4	1052 aa		11.62	□□□□□ -0.55
TUBA1B-208	ENST00000552984		A0A1W2PNU3	283 aa	Predicted RBP	11.61	□□□□□ -0.55
TUBA1B-208	ENST00000552984	NEMP2	A6NFY4	417 aa		11.61	□□□□□ -0.55
TUBA1B-208	ENST00000552984		H3BM21	787 aa		11.61	□□□□□ -0.55
TUBA1B-208	ENST00000552984	EEF2K	O00418	725 aa	Known RBP	11.61	□□□□□ -0.55
TUBA1B-208	ENST00000552984	FGF10	O15520	208 aa	Predicted RBP	11.61	□□□□□ -0.55
TUBA1B-208	ENST00000552984	BUB1B	O60566	1050 aa	Predicted RBP	11.61	□□□□□ -0.55
TUBA1B-208	ENST00000552984	PRAMEF11	O60813	436 aa		11.61	□□□□□ -0.55
TUBA1B-208	ENST00000552984	TCF4	P15884	667 aa		11.61	□□□□□ -0.55
TUBA1B-208	ENST00000552984	PAPOLA	P51003	745 aa	Known RBP	11.61	□□□□□ -0.55
TUBA1B-208	ENST00000552984	THOP1	P52888	689 aa		11.61	□□□□□ -0.55
TUBA1B-208	ENST00000552984	E2F1	Q01094	437 aa		11.61	□□□□□ -0.55
TUBA1B-208	ENST00000552984	CCDC173	Q0VFZ6	552 aa		11.61	□□□□□ -0.55
TUBA1B-208	ENST00000552984	ASIC2	Q16515	512 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms