RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 PRAMEF26H0Y7S4 382 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 RIOK3O14730 519 aaKnown RBP10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 BCAT2O15382 392 aaPredicted RBP10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 INSIG1O15503 277 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 MFSD11O43934 449 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 ZNF821O75541 412 aaPredicted RBP10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 PCDH8O95206 1070 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 CD160O95971 181 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 UGT2B4P06133 528 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 PYGLP06737 847 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 CYP2A6P11509 494 aaPredicted RBP10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 GRIA4P48058 902 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 PEX5P50542 639 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 CNTN1Q12860 1018 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 PRPSAP1Q14558 356 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 STAT4Q14765 748 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 TEX44Q53QW1 395 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 ARMC12Q5T9G4 340 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 DCAF12L1Q5VU92 463 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 KAZNQ674X7 775 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 SLC23A3Q6PIS1 610 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 ADAT2Q7Z6V5 191 aaKnown RBP10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 FAM124AQ86V42 546 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 HORMAD1Q86X24 394 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 TMEFF1Q8IYR6 380 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 TSEN2Q8NCE0 465 aaKnown RBP10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 DENND6BQ8NEG7 585 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 ATL2Q8NHH9 583 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 CXorf40AQ8TE69 158 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 PIGKQ92643 395 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 PBKQ96KB5 322 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 OLFM3Q96PB7 478 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 CDH19Q9H159 772 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 RAD18Q9NS91 495 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 ETNK2Q9NVF9 386 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 KLHL11Q9NVR0 708 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 LHX3Q9UBR4 397 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 MBD1Q9UIS9 605 aaPredicted RBP10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 SALL4Q9UJQ4 1053 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 PILRBQ9UKJ0 227 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 PHTF1Q9UMS5 762 aa10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 MUC22E2RYF6 1773 aaPredicted RBP10.38□□□□□ -0.75
TRAFD1-208ENST00000552890 A0A1W2PPC4 97 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 UPK3BL1B0FP48 263 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 UPK3BL2E5RIL1 263 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 H7C0C1 242 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 PSMD11O00231 422 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 PSMD3O43242 534 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 LATO43561 262 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 ANXA9O76027 345 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 FSBPO95073 299 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 CER1O95813 267 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 ZNF30P17039 623 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 ACSL1P33121 698 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 DRD3P35462 400 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 ATP5OP48047 213 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 EPHB1P54762 984 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 C21orf59P57076 290 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 GBE1Q04446 702 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 SLC10A7Q0GE19 358 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 SUZ12Q15022 739 aaKnown RBP10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 UGP2Q16851 508 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 INAVAQ3KP66 663 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 PLA2G2CQ5R387 149 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 MEI1Q5TIA1 1274 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 AGBL4Q5VU57 503 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 NCEH1Q6PIU2 408 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 AADATQ8N5Z0 425 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 SNX19Q92543 992 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 KLHL32Q96NJ5 620 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 LENG8Q96PV6 779 aaPredicted RBP10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 IL12RB2Q99665 862 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 SLC25A51Q9H1U9 297 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 ARRDC1-AS1Q9H2J1 176 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 NT5MQ9NPB1 228 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 SEMA4GQ9NTN9 838 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 POLR3BQ9NW08 1133 aaPredicted RBP10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 AAR2Q9Y312 384 aaKnown RBP10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 HYOU1Q9Y4L1 999 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 HS3ST3A1Q9Y663 406 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 THADAQ6YHU6 1953 aa10.37□□□□□ -0.75
TRAFD1-208ENST00000552890 GON4LQ3T8J9 2241 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 FAM47DPA6NHR8 397 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 PDE2AO00408 941 aaPredicted RBP10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 CES2O00748 559 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 HTRA2O43464 458 aaPredicted RBP10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 OPHN1O60890 802 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 FTCDO95954 541 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 EPOP01588 193 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 JCHAINP01591 159 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 TUBB4AP04350 444 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 VAV1P15498 845 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 BCKDHBP21953 392 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 HNRNPA2B1P22626 353 aaKnown RBP10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 LIMK1P53667 647 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 DYNLT1P63172 113 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 SLC14A1Q13336 389 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 ARHGEF7Q14155 803 aa10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 PRKD1Q15139 912 aaPredicted RBP10.36□□□□□ -0.75
TRAFD1-208ENST00000552890 NOMO1Q15155 1222 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms