RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 CCDC181Q5TID7 509 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 AFMIDQ63HM1 303 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 ZNF776Q68DI1 518 aaPredicted RBP10.1□□□□□ -0.79
LETMD1-234ENST00000552645 C8orf74Q6P047 294 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 WDR5BQ86VZ2 330 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 RASSF3Q86WH2 238 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 UBL4BQ8N7F7 174 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 FRMD1Q8N878 549 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 CCNYQ8ND76 341 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 NSMCE1Q8WV22 266 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 OR8D1Q8WZ84 308 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 CCT6BQ92526 530 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 FAF2Q96CS3 445 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 RBM41Q96IZ5 413 aaKnown RBP10.1□□□□□ -0.79
LETMD1-234ENST00000552645 EXOC2Q96KP1 924 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 SPACA7Q96KW9 195 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 ALS2CR12Q96Q35 445 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 HEMGNQ9BXL5 484 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 TMBIM4Q9HC24 238 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 NOP53Q9NZM5 478 aaKnown RBP10.1□□□□□ -0.79
LETMD1-234ENST00000552645 PCDHA3Q9Y5H8 950 aa10.1□□□□□ -0.79
LETMD1-234ENST00000552645 GON4LQ3T8J9 2241 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 KRIT1O00522 736 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 MID1O15344 667 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 HRO43593 1189 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 CST8O60676 142 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 PRAMEF11O60813 436 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 CD160O95971 181 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 CDKN2BP42772 138 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 RPS14P62263 151 aaKnown RBP10.09□□□□□ -0.79
LETMD1-234ENST00000552645 IL10RBQ08334 325 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 ZNF211Q13398 564 aaPredicted RBP10.09□□□□□ -0.79
LETMD1-234ENST00000552645 BYSLQ13895 437 aaKnown RBP10.09□□□□□ -0.79
LETMD1-234ENST00000552645 SIM2Q14190 667 aaPredicted RBP10.09□□□□□ -0.79
LETMD1-234ENST00000552645 CST6Q15828 149 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 TFDP3Q5H9I0 405 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 AGBL2Q5U5Z8 902 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 AADACL2Q6P093 401 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 NPNTQ6UXI9 565 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 DPY19L3Q6ZPD9 716 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 DSG4Q86SJ6 1040 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.09□□□□□ -0.79
LETMD1-234ENST00000552645 DEFB119Q8N690 84 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 DRAXINQ8NBI3 349 aaPredicted RBP10.09□□□□□ -0.79
LETMD1-234ENST00000552645 CHST14Q8NCH0 376 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 ZBTB44Q8NCP5 570 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 OR2A12Q8NGT7 310 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 EXD1Q8NHP7 514 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 ALG3Q92685 438 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 HAUS1Q96CS2 278 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 SEC16BQ96JE7 1060 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 FAM129BQ96TA1 746 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 CINPQ9BW66 212 aaPredicted RBP10.09□□□□□ -0.79
LETMD1-234ENST00000552645 CEP44Q9C0F1 390 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 RSPH9Q9H1X1 276 aaPredicted RBP10.09□□□□□ -0.79
LETMD1-234ENST00000552645 ZDHHC6Q9H6R6 413 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 FBRSQ9HAH7 460 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 SAE1Q9UBE0 346 aaPredicted RBP10.09□□□□□ -0.79
LETMD1-234ENST00000552645 HECAQ9UBI9 543 aaPredicted RBP10.09□□□□□ -0.79
LETMD1-234ENST00000552645 RALGAPA1Q6GYQ0 2036 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 FRYLO94915 3013 aa10.09□□□□□ -0.79
LETMD1-234ENST00000552645 MYO15AQ9UKN7 3530 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 CCDC163A0A0D9SF12 145 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 GOLGA6L10A6NI86 522 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 MIF4GDA9UHW6 222 aaKnown RBP10.08□□□□□ -0.8
LETMD1-234ENST00000552645 PLK4O00444 970 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 KPNA3O00505 521 aaPredicted RBP10.08□□□□□ -0.8
LETMD1-234ENST00000552645 ZNF185O15231 689 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 RNASEH2AO75792 299 aaKnown RBP10.08□□□□□ -0.8
LETMD1-234ENST00000552645 KRT14P02533 472 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 ZFXP17010 805 aaPredicted RBP10.08□□□□□ -0.8
LETMD1-234ENST00000552645 CTNNA2P26232 953 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 GKP32189 559 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 CHRNA3P32297 505 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 CETN2P41208 172 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 GARSP41250 739 aaKnown RBP10.08□□□□□ -0.8
LETMD1-234ENST00000552645 PAFAH1B1P43034 410 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 VASPP50552 380 aaPredicted RBP10.08□□□□□ -0.8
LETMD1-234ENST00000552645 TPMTP51580 245 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 METAP1P53582 386 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 SEC24CP53992 1094 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 NHLH1Q02575 133 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 GALNT2Q10471 571 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 SLC10A2Q12908 348 aaPredicted RBP10.08□□□□□ -0.8
LETMD1-234ENST00000552645 BLMHQ13867 455 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 TFDP2Q14188 446 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 PAFAH1B3Q15102 231 aaKnown RBP10.08□□□□□ -0.8
LETMD1-234ENST00000552645 CARD16Q5EG05 197 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 ARSIQ5FYB1 569 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 PCDH20Q8N6Y1 951 aaKnown RBP10.08□□□□□ -0.8
LETMD1-234ENST00000552645 PAF1Q8N7H5 531 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 PLD5Q8N7P1 536 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 PIP4K2CQ8TBX8 421 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 ZFAND2BQ8WV99 257 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 GAB3Q8WWW8 586 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 NELL1Q92832 810 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 OMDQ99983 421 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 PDFQ9HBH1 243 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 DTLQ9NZJ0 730 aa10.08□□□□□ -0.8
LETMD1-234ENST00000552645 IL36AQ9UHA7 158 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms