RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 SLC41A1Q8IVJ1 513 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 RASGEF1CQ8N431 466 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 CCNYQ8ND76 341 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 ARRDC2Q8TBH0 407 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 NSMCE1Q8WV22 266 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 ATOH1Q92858 354 aaPredicted RBP9.23□□□□□ -0.93
CCDC59-207ENST00000552606 TADA1Q96BN2 335 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 TOE1Q96GM8 510 aaKnown RBP9.23□□□□□ -0.93
CCDC59-207ENST00000552606 PPP1R16AQ96I34 528 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 FAM118BQ9BPY3 351 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 HDAC8Q9BY41 377 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 CEP41Q9BYV8 373 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 POLR1EQ9GZS1 481 aaKnown RBP9.23□□□□□ -0.93
CCDC59-207ENST00000552606 NEUROG2Q9H2A3 272 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 NOD2Q9HC29 1040 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 FBXL12Q9NXK8 326 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 DKK3Q9UBP4 350 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 SNX12Q9UMY4 172 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 SMG5Q9UPR3 1016 aaKnown RBP9.23□□□□□ -0.93
CCDC59-207ENST00000552606 SDK1Q7Z5N4 2213 aa9.23□□□□□ -0.93
CCDC59-207ENST00000552606 BCLAF3A2AJT9 711 aaKnown RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 AREL1O15033 823 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 MTSS1O43312 755 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 FZD6O60353 706 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 SOCS5O75159 536 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 RNASEH2AO75792 299 aaKnown RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 SEMA4FO95754 770 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 RBP3P10745 1247 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 ADRB3P13945 408 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 RBL1P28749 1068 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 OXTRP30559 389 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 CXCR5P32302 372 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 CD68P34810 354 aaPredicted RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 MAPK8P45983 427 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 SCNN1BP51168 640 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 NEK3P51956 506 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 EIF3EP60228 445 aaKnown RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 PPP2CBP62714 309 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 PPP2CAP67775 309 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 TRAF2Q12933 501 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 SIM2Q14190 667 aaPredicted RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 OASLQ15646 514 aaKnown RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 SPDYCQ5MJ68 293 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 PEAR1Q5VY43 1037 aaPredicted RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 GDPD4Q6W3E5 623 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 SLC36A4Q6YBV0 504 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 ERN2Q76MJ5 926 aaKnown RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 FAM124AQ86V42 546 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 CAMK1DQ8IU85 385 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 CDKL3Q8IVW4 592 aaPredicted RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 BBS5Q8N3I7 341 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 RYBPQ8N488 228 aaPredicted RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 HDDC3Q8N4P3 179 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 TTC13Q8NBP0 860 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 COG1Q8WTW3 980 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 HTR3CQ8WXA8 447 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 ATG4AQ8WYN0 398 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 ZNF641Q96N77 438 aaPredicted RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 KLHL32Q96NJ5 620 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 OSBPL9Q96SU4 736 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 SEMA3CQ99985 751 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 GORASP1Q9BQQ3 440 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 ORAI3Q9BRQ5 295 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 BTBD1Q9H0C5 482 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 PCED1AQ9H1Q7 454 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 SUV39H2Q9H5I1 410 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 C6orf106Q9H6K1 298 aaPredicted RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 ATP13A3Q9H7F0 1226 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 C10orf88Q9H8K7 445 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 USP29Q9HBJ7 922 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 SGK2Q9HBY8 427 aa9.22□□□□□ -0.93
CCDC59-207ENST00000552606 RBM22Q9NW64 420 aaKnown RBP eCLIP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 TTC7AQ9ULT0 858 aaPredicted RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 ZFC3H1O60293 1989 aaKnown RBP9.22□□□□□ -0.93
CCDC59-207ENST00000552606 GPR179Q6PRD1 2367 aa9.21□□□□□ -0.93
CCDC59-207ENST00000552606 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.21□□□□□ -0.94
CCDC59-207ENST00000552606 C16orf96A6NNT2 1141 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 AP1G1O43747 822 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 LIASO43766 372 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 EPN2O95208 641 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 JCHAINP01591 159 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 FGGP02679 453 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 IGHV4-34P06331 123 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 SERPINA4P29622 427 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 PTGER3P43115 390 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 GDF10P55107 478 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 GNG11P61952 73 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 SKOR1P84550 965 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 RPL6Q02878 288 aaKnown RBP9.21□□□□□ -0.94
CCDC59-207ENST00000552606 RAD51Q06609 339 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 SLC14A2Q15849 920 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 TEX44Q53QW1 395 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 CCDC181Q5TID7 509 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 DMRTA1Q5VZB9 504 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 PAPD7Q5XG87 772 aaKnown RBP9.21□□□□□ -0.94
CCDC59-207ENST00000552606 LAIR1Q6GTX8 287 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 BRAT1Q6PJG6 821 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 PRR23BQ6ZRT6 265 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.94
CCDC59-207ENST00000552606 CEP68Q76N32 757 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms