RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 SLC33A1O00400 549 aaPredicted RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 TADA2AO75478 443 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 DAB1O75553 588 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 SPAG6O75602 509 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 LARGE1O95461 756 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 DIRAS3O95661 229 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 PLGP00747 810 aaPredicted RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 CFIP05156 583 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 GRPP07492 148 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 MMP2P08253 660 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 SBK3P0C264 359 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 NCF1P14598 390 aaPredicted RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 ZFXP17010 805 aaPredicted RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 MC5RP33032 325 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 RDXP35241 583 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 MDH1P40925 334 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 GCLCP48506 637 aaPredicted RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 KHKP50053 298 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 KIAA1024LP59773 190 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 MXRA7P84157 204 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 CBFBQ13951 182 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 IL11RAQ14626 422 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 SLC9B1Q4ZJI4 515 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 LRRC24Q50LG9 513 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 UTP14CQ5TAP6 766 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 AADACL4Q5VUY2 407 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 CDC73Q6P1J9 531 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 MFSD7Q6UXD7 560 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 INTS8Q75QN2 995 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 PARS2Q7L3T8 475 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 ADCK2Q7Z695 626 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 PLXDC1Q8IUK5 500 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 ARHGAP12Q8IWW6 846 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 MINDY1Q8N5J2 469 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 MB21D1Q8N884 522 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 PI4KAP1Q8N8J0 262 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 IQUBQ8NA54 791 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 KDM1BQ8NB78 822 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 BCAS4Q8TDM0 211 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 ST7LQ8TDW4 575 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 NACC2Q96BF6 587 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 ADAD1Q96M93 576 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 INTS14Q96SY0 518 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 PRRX2Q99811 253 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 SLC25A32Q9H2D1 315 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 EHD1Q9H4M9 534 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 IARS2Q9NSE4 1012 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 ING3Q9NXR8 418 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 ALKBH4Q9NXW9 302 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 WSB2Q9NYS7 404 aaPredicted RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 MPP6Q9NZW5 540 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 CDH22Q9UJ99 828 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 TLK1Q9UKI8 766 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 RUVBL1Q9Y265 456 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 VWA7Q9Y334 891 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 ENTPD2Q9Y5L3 495 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 TTC41PQ6P2S7 1318 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 ATRNL1Q5VV63 1379 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 CXCL11O14625 94 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 TO15178 435 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 RNF113AO15541 343 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 FOXS1O43638 330 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 GMFGO60234 142 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 NMT2O60551 498 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 CCNT2O60583 730 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 PRAMEF12O95522 483 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 TPM1P09493 284 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 UROSP10746 265 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 IL2RBP14784 551 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 CSF2RAP15509 400 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 CR2P20023 1033 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 HSD17B2P37059 387 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 ALDH1A3P47895 512 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 PTDSS1P48651 473 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 NME5P56597 212 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 YWHAZP63104 245 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 PMP22Q01453 160 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 FHL2Q14192 279 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 FRG1Q14331 258 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 ZNF273Q14593 569 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 C15orf59Q2T9L4 293 aaPredicted RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 LETM2Q2VYF4 491 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 KRT71Q3SY84 523 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 KCNT1Q5JUK3 1230 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 ARMCX2Q7L311 632 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 ZNF572Q7Z3I7 529 aaPredicted RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 RFX6Q8HWS3 928 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 TICAM1Q8IUC6 712 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 BANPQ8N9N5 519 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 SLC4A11Q8NBS3 891 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 RBM15BQ8NDT2 890 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 OR52M1Q8NGK5 317 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.3□□□□□ -1.72
USP44-208ENST00000552440 THRSPQ92748 146 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 GFM2Q969S9 779 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 KLHL29Q96CT2 875 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 MRPL38Q96DV4 380 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 SGF29Q96ES7 293 aa4.3□□□□□ -1.72
USP44-208ENST00000552440 THUMPD2Q9BTF0 503 aaKnown RBP4.3□□□□□ -1.72
USP44-208ENST00000552440 MECRQ9BV79 373 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms