RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 GUCY1A2P33402 732 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 RAB28P51157 221 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 HAND2P61296 217 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 PMP22Q01453 160 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 GRAPQ13588 217 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 THOC5Q13769 683 aaKnown RBP6.42□□□□□ -1.38
VPS29-210ENST00000552130 GAMTQ14353 236 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 RRS1Q15050 365 aaKnown RBP6.42□□□□□ -1.38
VPS29-210ENST00000552130 STK11Q15831 433 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 KRT71Q3SY84 523 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 KCNT1Q5JUK3 1230 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 ZNF569Q5MCW4 686 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 PRR31Q5SQ13 230 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 UBAP2Q5T6F2 1119 aaKnown RBP6.42□□□□□ -1.38
VPS29-210ENST00000552130 DPY19L2P1Q6NXN4 242 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 SLC36A4Q6YBV0 504 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 RRM2BQ7LG56 351 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 KCTD20Q7Z5Y7 419 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 LGI4Q8N135 537 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 KDM8Q8N371 416 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 TC2NQ8N9U0 490 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 SLC4A11Q8NBS3 891 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 SLC2A12Q8TD20 617 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 METTL21AQ8WXB1 218 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 NACC2Q96BF6 587 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 MRPL38Q96DV4 380 aaKnown RBP6.42□□□□□ -1.38
VPS29-210ENST00000552130 EDC3Q96F86 508 aaKnown RBP6.42□□□□□ -1.38
VPS29-210ENST00000552130 EPSTI1Q96J88 318 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 KLHL15Q96M94 604 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 SRSF8Q9BRL6 282 aaKnown RBP6.42□□□□□ -1.38
VPS29-210ENST00000552130 NUDT22Q9BRQ3 303 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 C11orf84Q9BUA3 381 aaPredicted RBP6.42□□□□□ -1.38
VPS29-210ENST00000552130 AMNQ9BXJ7 453 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 LRRCC1Q9C099 1032 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 CCDC134Q9H6E4 229 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 PCDH18Q9HCL0 1135 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 TLR8Q9NR97 1041 aaKnown RBP6.42□□□□□ -1.38
VPS29-210ENST00000552130 RLIMQ9NVW2 624 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 PSD3Q9NYI0 1048 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 TRPC4Q9UBN4 977 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 TRPS1Q9UHF7 1281 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 TEKT2Q9UIF3 430 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 PSME2Q9UL46 239 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 MKLN1Q9UL63 735 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 TSC22D4Q9Y3Q8 395 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 LIPGQ9Y5X9 500 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 ACTL7AQ9Y615 435 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 TEX264Q9Y6I9 313 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 AOX1Q06278 1338 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 SALL3Q9BXA9 1300 aa6.42□□□□□ -1.38
VPS29-210ENST00000552130 A0A1W2PQF6 199 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 A6NL46 340 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 CYR61O00622 381 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 IFIT3O14879 490 aaKnown RBP6.41□□□□□ -1.38
VPS29-210ENST00000552130 RNF113AO15541 343 aaKnown RBP6.41□□□□□ -1.38
VPS29-210ENST00000552130 PAPSS1O43252 624 aaPredicted RBP6.41□□□□□ -1.38
VPS29-210ENST00000552130 SPOPO43791 374 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 ERLIN1O75477 346 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 TGFAP01135 160 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 SBK3P0C264 359 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 CYP2C8P10632 490 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 ACP5P13686 325 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 GLRA2P23416 452 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 APEX1P27695 318 aaKnown RBP6.41□□□□□ -1.38
VPS29-210ENST00000552130 CPOXP36551 454 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 HMGA2P52926 109 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 GFPT1Q06210 699 aaPredicted RBP6.41□□□□□ -1.38
VPS29-210ENST00000552130 CD69Q07108 199 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 NIPAL4Q0D2K0 466 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 NFATC3Q12968 1075 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 IL24Q13007 206 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 DPYSQ14117 519 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 CCDC57Q2TAC2 916 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 ZNF750Q32MQ0 723 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 DPCR1Q3MIW9 517 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 KCTD21Q4G0X4 260 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 AMOTQ4VCS5 1084 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 PABPC1LQ4VXU2 614 aaKnown RBP6.41□□□□□ -1.38
VPS29-210ENST00000552130 PLA1AQ53H76 456 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 C19orf54Q5BKX5 351 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 RBM20Q5T481 1227 aaKnown RBP6.41□□□□□ -1.38
VPS29-210ENST00000552130 CACHD1Q5VU97 1274 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 AFTPHQ6ULP2 937 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 SERPINA13PQ6UXR4 307 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 DNAJC10Q8IXB1 793 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 PTGR2Q8N8N7 351 aaPredicted RBP6.41□□□□□ -1.38
VPS29-210ENST00000552130 BBOF1Q8ND07 529 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 OR5AN1Q8NGI8 311 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 GANCQ8TET4 914 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 C17orf50Q8WW18 174 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 CASKIN2Q8WXE0 1202 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 PTERQ96BW5 349 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 MCRS1Q96EZ8 462 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 LINC00615Q96LM1 132 aaPredicted RBP6.41□□□□□ -1.38
VPS29-210ENST00000552130 WRNIP1Q96S55 665 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 MAP7D2Q96T17 732 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 KIFC3Q9BVG8 833 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 CARD6Q9BX69 1037 aa6.41□□□□□ -1.38
VPS29-210ENST00000552130 MOV10L1Q9BXT6 1211 aaKnown RBP6.41□□□□□ -1.38
VPS29-210ENST00000552130 IMPG2Q9BZV3 1241 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms