RNA–Protein interactions for RNA: ENST00000550859.5

SMARCC2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-211ENST00000550859 ADAM10O14672 748 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 PRPF4O43172 522 aaKnown RBP eCLIP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 TLR2O60603 784 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 KINO60870 393 aaKnown RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 SURF6O75683 361 aaKnown RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 RPP40O75818 363 aaKnown RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 TNFRSF6BO95407 300 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 TOP3BO95985 862 aaKnown RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 ALDOAP04075 364 aaKnown RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 IFIT1P09914 478 aaKnown RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 TMEM191BP0C7N4 346 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 TBC1D3HP0C7X1 549 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 RPS12P25398 132 aaKnown RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 HOXD10P28358 340 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 HOXA7P31268 230 aaPredicted RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 RFX5P48382 616 aaPredicted RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 CLK1P49759 484 aaKnown RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 TLE3Q04726 772 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 G3BP1Q13283 466 aaKnown RBP eCLIP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 PDCD2Q16342 344 aaPredicted RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 CCDC38Q502W7 563 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 CCDC92Q53HC0 331 aaPredicted RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 DNAJC21Q5F1R6 531 aaKnown RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 LIPMQ5VYY2 423 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 TBC1D3GQ6DHY5 549 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 TBC1D3CQ6IPX1 549 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 CCDC70Q6NSX1 233 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 KLHL17Q6TDP4 642 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 ATF7IPQ6VMQ6 1270 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 SLC39A5Q6ZMH5 540 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 ATG9AQ7Z3C6 839 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 C1QL2Q7Z5L3 287 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 TRIM74Q86UV6 250 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 TRIM73Q86UV7 250 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 RFX6Q8HWS3 928 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 TBC1D3Q8IZP1 549 aaPredicted RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 OR4N4Q8N0Y3 316 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 AGBL3Q8NEM8 1001 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 POF1BQ8WVV4 589 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 GOLGA1Q92805 767 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 MCRS1Q96EZ8 462 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 CLMNQ96JQ2 1002 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 FCRL4Q96PJ5 515 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 RTKNQ9BST9 563 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 KATNAL1Q9BW62 490 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 SCNM1Q9BWG6 230 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 TMEM39BQ9GZU3 492 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 SPRTNQ9H040 489 aaPredicted RBP4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 VPS33BQ9H267 617 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 TMEM45AQ9NWC5 275 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 DACT1Q9NYF0 836 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 BLOC1S6Q9UL45 172 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 CNTN6Q9UQ52 1028 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 ARFGEF1Q9Y6D6 1849 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 ARFGEF2Q9Y6D5 1785 aa4.81□□□□□ -1.64
SMARCC2-211ENST00000550859 ZMYM2Q9UBW7 1377 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 MROH5Q6ZUA9 1318 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 SLC22A23A1A5C7 686 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 DPPA5A6NC42 116 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 TMEM110-MUSTN1A8MSY1 372 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 TMCO5BA8MYB1 307 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 M0QYT0 321 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 SYT5O00445 386 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 MTA2O94776 668 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 CSTBP04080 98 aaKnown RBP4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 CYP3A4P08684 503 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 PDIA3P30101 505 aaKnown RBP4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 SERPINF1P36955 418 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 SLC37A1P57057 533 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 RWDD2BP57060 319 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 RPL15P61313 204 aaKnown RBP4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 RNASELQ05823 741 aaKnown RBP4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 DMWDQ09019 674 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 SF3A3Q12874 501 aaKnown RBP eCLIP4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 BLMHQ13867 455 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 E2F5Q15329 346 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 RPS6KA2Q15349 733 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 RBMS2Q15434 407 aaKnown RBP4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 TBRG1Q3YBR2 411 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 RGMBQ6NW40 437 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 ZNF793Q6ZN11 406 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 LCA5Q86VQ0 697 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 RHPN2Q8IUC4 686 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 HSCBQ8IWL3 235 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 SUGP1Q8IWZ8 645 aaKnown RBP4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 EFCAB13Q8IY85 973 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 ENAHQ8N8S7 591 aaPredicted RBP4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 ZBTB9Q96C00 473 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 HMCESQ96FZ2 354 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 TTC14Q96N46 770 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 TRMOQ9BU70 441 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 TMEM120AQ9BXJ8 343 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 DEFB129Q9H1M3 183 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 IL1RAPL2Q9NP60 686 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 QPCTLQ9NXS2 382 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 RAB21Q9UL25 225 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 NOL7Q9UMY1 257 aaKnown RBP4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 SLC8A2Q9UPR5 921 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 EXOC6BQ9Y2D4 811 aa4.8□□□□□ -1.64
SMARCC2-211ENST00000550859 DLEC1Q9Y238 1755 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms