RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 IL1RAPL1Q9NZN1 696 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 SEPT3Q9UH03 358 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 DNMT3LQ9UJW3 386 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 PRPF19Q9UMS4 504 aaKnown RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 VPS9D1Q9Y2B5 631 aa9.03□□□□□ -0.96
TMEM116-209ENST00000550020 ARIH1Q9Y4X5 557 aaPredicted RBP9.03□□□□□ -0.96
TMEM116-209ENST00000550020 LOC285095A0A1B0GVY8 99 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 MTMR11A4FU01 709 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 RGSL1A5PLK6 1076 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 MROH6A6NGR9 719 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 MATN2O00339 956 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 PHGDHO43175 533 aaKnown RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 PRAMEF11O60813 436 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 GLP2RO95838 553 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 TOP3BO95985 862 aaKnown RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 PEX11BO96011 259 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 SERPINF2P08697 491 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 ZDHHC11BP0C7U3 371 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 OGNP20774 298 aaKnown RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 ATP6V1C1P21283 382 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 TACR2P21452 398 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 GRK4P32298 578 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 PTDSS1P48651 473 aaKnown RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 CDH4P55283 916 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 ARPP19P56211 112 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 IRF9Q00978 393 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 GALNT1Q10472 559 aaPredicted RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 CTBP1Q13363 440 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 UBAP2LQ14157 1087 aaKnown RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 C5orf22Q49AR2 442 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 HSF5Q4G112 596 aaPredicted RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 KHDC1Q4VXA5 237 aaKnown RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 FAM182AQ5T1J6 154 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 CES4AQ5XG92 561 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 RAP1GAP2Q684P5 730 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 FBXL22Q6P050 247 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 TFAP2DQ7Z6R9 452 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 ADGRG6Q86SQ4 1221 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 MIB1Q86YT6 1006 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 PLD6Q8N2A8 252 aaKnown RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 FSTL5Q8N475 847 aaPredicted RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 SLC25A41Q8N5S1 370 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 CPSF7Q8N684 471 aaKnown RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 ZNF781Q8N8C0 355 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 ATAD1Q8NBU5 361 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 GPR150Q8NGU9 434 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 ACTRT2Q8TDY3 377 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 LINC01599Q8WXQ3 324 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 TADA1Q96BN2 335 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 NAF1Q96HR8 494 aaKnown RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 ZNF778Q96MU6 729 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 CASD1Q96PB1 797 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 PGLYRP2Q96PD5 576 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 TTPALQ9BTX7 342 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 TTLL2Q9BWV7 592 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 NOL6Q9H6R4 1146 aaKnown RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 PFDN4Q9NQP4 134 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 CPSF2Q9P2I0 782 aaKnown RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 XPR1Q9UBH6 696 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 TMCO1Q9UM00 188 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 PLA2G4CQ9UP65 541 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 BACE2Q9Y5Z0 518 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 NUMBLQ9Y6R0 609 aa9.02□□□□□ -0.97
TMEM116-209ENST00000550020 TRIP12Q14669 1992 aaPredicted RBP9.02□□□□□ -0.97
TMEM116-209ENST00000550020 GOLGA8CPA6NN73 597 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 SLC38A8A6NNN8 435 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 TARM1B6A8C7 271 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 H0Y3Z8 333 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 ZNF195O14628 629 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 ACSL4O60488 711 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 CCNT2O60583 730 aaKnown RBP9.01□□□□□ -0.97
TMEM116-209ENST00000550020 TLR5O60602 858 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 SMIM24O75264 130 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 CLDN11O75508 207 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 PIGNO95427 931 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 INHAP05111 366 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 RPSAP08865 295 aaKnown RBP9.01□□□□□ -0.97
TMEM116-209ENST00000550020 COX4I1P13073 169 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 TFEBP19484 476 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 GLDCP23378 1020 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 PPARGP37231 505 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-209ENST00000550020 CPA2P48052 419 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 NUMBP49757 651 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 NAGLUP54802 743 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 TAS2R39P59534 338 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 XIAPP98170 497 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 ACVR1Q04771 509 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 NSUN2Q08J23 767 aaKnown RBP eCLIP9.01□□□□□ -0.97
TMEM116-209ENST00000550020 SLC10A7Q0GE19 358 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 KLF10Q13118 480 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 MBTPS1Q14703 1052 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 NAA25Q14CX7 972 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 VEPH1Q14D04 833 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 DLG2Q15700 870 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 TAF12Q16514 161 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 ACCSLQ4AC99 568 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 ACSBG2Q5FVE4 666 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 ARL13AQ5H913 290 aaPredicted RBP9.01□□□□□ -0.97
TMEM116-209ENST00000550020 RFWD3Q6PCD5 774 aa9.01□□□□□ -0.97
TMEM116-209ENST00000550020 ZNF783Q6ZMS7 281 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms