RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 HSPA12BQ96MM6 686 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 TLR10Q9BXR5 811 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 VPS45Q9NRW7 570 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 KCND1Q9NSA2 647 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 NCDNQ9UBB6 729 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 SUSD2Q9UGT4 822 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 FADS3Q9Y5Q0 445 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 KCNK1O00180 336 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 PLK4O00444 970 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 AREL1O15033 823 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 TSPAN6O43657 245 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 GFRA3O60609 400 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 JCHAINP01591 159 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 IGHV4-34P06331 123 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 ZNF806P0C7X5 589 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 TGM1P22735 817 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 CD27P26842 260 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 LLGL1Q15334 1064 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 SLC14A2Q15849 920 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 CSRP2Q16527 193 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 UGP2Q16851 508 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 POM121L1PQ3SYA9 428 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 AADACL2Q6P093 401 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 CYP2U1Q7Z449 544 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 TTC7BQ86TV6 843 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 CAMK1DQ8IU85 385 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 CNTD1Q8N815 330 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 ARRDC2Q8TBH0 407 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 ACTL9Q8TC94 416 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 FEM1CQ96JP0 617 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 NSMCE3Q96MG7 304 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 ARRDC1-AS1Q9H2J1 176 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 NOD2Q9HC29 1040 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 NT5MQ9NPB1 228 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 SCUBE2Q9NQ36 999 aa14.62□□□□□ -0.07
DDX54-203ENST00000546869 GPR179Q6PRD1 2367 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 ZFHX2Q9C0A1 2572 aaPredicted RBP14.61□□□□□ -0.07
DDX54-203ENST00000546869 A0A1W2PPC4 97 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 MEI4A8MW99 385 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 PRR5-ARHGAP8B1AHC4 643 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 RNGTTO60942 597 aaKnown RBP14.61□□□□□ -0.07
DDX54-203ENST00000546869 NEBLO76041 1014 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 PIGNO95427 931 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 HLA-DQB2P05538 268 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 TIMP2P16035 220 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 ITPKAP23677 461 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 MSNP26038 577 aaKnown RBP14.61□□□□□ -0.07
DDX54-203ENST00000546869 MPLP40238 635 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 OTUD4Q01804 1114 aaKnown RBP14.61□□□□□ -0.07
DDX54-203ENST00000546869 CREB5Q02930 508 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 ZBTB17Q13105 803 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 ZNF211Q13398 564 aaPredicted RBP14.61□□□□□ -0.07
DDX54-203ENST00000546869 SLC45A4Q5BKX6 768 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 SEL1L2Q5TEA6 688 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 CCDC181Q5TID7 509 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 KIAA1161Q6NSJ0 714 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 SLC23A3Q6PIS1 610 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 ABCA7Q8IZY2 2146 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 DEFB119Q8N690 84 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 HTR3CQ8WXA8 447 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 ASB12Q8WXK4 309 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 TEKT5Q96M29 485 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 QKIQ96PU8 341 aaKnown RBP eCLIP14.61□□□□□ -0.07
DDX54-203ENST00000546869 SEMA3CQ99985 751 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 ORAI3Q9BRQ5 295 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 FRMD8P1Q9BZ68 369 aaPredicted RBP14.61□□□□□ -0.07
DDX54-203ENST00000546869 TMEM74BQ9NUR3 256 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 DMTF1Q9Y222 760 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 PPIL1Q9Y3C6 166 aa14.61□□□□□ -0.07
DDX54-203ENST00000546869 OTOGLQ3ZCN5 2332 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 DMDP11532 3685 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 CFAP69A5D8W1 941 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 FZD6O60353 706 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 SERPINF2P08697 491 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 GNSP15586 552 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 PTPN3P26045 913 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 MAXP61244 160 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 RPS21P63220 83 aaKnown RBP14.6□□□□□ -0.07
DDX54-203ENST00000546869 ITKQ08881 620 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 ELP6Q0PNE2 266 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 WASHC5Q12768 1159 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 DUOXA1Q1HG43 343 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 TMEM52BQ4KMG9 183 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 TMEM259Q4ZIN3 620 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 ARMCX6Q7L4S7 300 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 PRPF39Q86UA1 669 aaKnown RBP14.6□□□□□ -0.07
DDX54-203ENST00000546869 ZC3H18Q86VM9 953 aaKnown RBP14.6□□□□□ -0.07
DDX54-203ENST00000546869 HORMAD1Q86X24 394 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 LRRN4Q8WUT4 740 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 PIGKQ92643 395 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 TADA1Q96BN2 335 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 HAUS1Q96CS2 278 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 FERMT1Q9BQL6 677 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 SEMA4GQ9NTN9 838 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 TRHDEQ9UKU6 1024 aa14.6□□□□□ -0.07
DDX54-203ENST00000546869 MYO15AQ9UKN7 3530 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 A0A1B0GTW7 788 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 FAM47DPA6NHR8 397 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 UPK3BL1B0FP48 263 aa14.59□□□□□ -0.07
DDX54-203ENST00000546869 UPK3BL2E5RIL1 263 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms