RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 SLC10A7Q0GE19 358 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 GALNT2Q10471 571 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 LAYNQ6UX15 382 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 DBX2Q6ZNG2 339 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 SRLQ86TD4 932 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 ATPAF2Q8N5M1 289 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 PQLC3Q8N755 202 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 ASB12Q8WXK4 309 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 SPOCK2Q92563 424 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 RAPGEF5Q92565 580 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 FATE1Q969F0 183 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 ECHDC3Q96DC8 303 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 FEM1CQ96JP0 617 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 CINPQ9BW66 212 aaPredicted RBP12.01□□□□□ -0.49
YBX3-217ENST00000546164 SUV39H2Q9H5I1 410 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 ERVMER34-1Q9H9K5 563 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 AASDHPPTQ9NRN7 309 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 IMPACTQ9P2X3 320 aa12.01□□□□□ -0.49
YBX3-217ENST00000546164 FNDC3AQ9Y2H6 1198 aaKnown RBP12.01□□□□□ -0.49
YBX3-217ENST00000546164 CEP295Q9C0D2 2601 aa12□□□□□ -0.49
YBX3-217ENST00000546164 SOWAHDA6NJG2 315 aa12□□□□□ -0.49
YBX3-217ENST00000546164 TLR4O00206 839 aa12□□□□□ -0.49
YBX3-217ENST00000546164 MUSKO15146 869 aa12□□□□□ -0.49
YBX3-217ENST00000546164 MFSD11O43934 449 aa12□□□□□ -0.49
YBX3-217ENST00000546164 PCDHGA12O60330 932 aa12□□□□□ -0.49
YBX3-217ENST00000546164 BUB1BO60566 1050 aaPredicted RBP12□□□□□ -0.49
YBX3-217ENST00000546164 MAGEC1O60732 1142 aa12□□□□□ -0.49
YBX3-217ENST00000546164 PIGNO95427 931 aa12□□□□□ -0.49
YBX3-217ENST00000546164 TIMP2P16035 220 aa12□□□□□ -0.49
YBX3-217ENST00000546164 PRLRP16471 622 aa12□□□□□ -0.49
YBX3-217ENST00000546164 CR2P20023 1033 aa12□□□□□ -0.49
YBX3-217ENST00000546164 HNRNPA2B1P22626 353 aaKnown RBP12□□□□□ -0.49
YBX3-217ENST00000546164 GARSP41250 739 aaKnown RBP12□□□□□ -0.49
YBX3-217ENST00000546164 NOVA1P51513 510 aaKnown RBP12□□□□□ -0.49
YBX3-217ENST00000546164 NXPH1P58417 271 aa12□□□□□ -0.49
YBX3-217ENST00000546164 HNRNPDQ14103 355 aaKnown RBP12□□□□□ -0.49
YBX3-217ENST00000546164 RALGPS1Q5JS13 557 aa12□□□□□ -0.49
YBX3-217ENST00000546164 SEL1L3Q68CR1 1132 aa12□□□□□ -0.49
YBX3-217ENST00000546164 BRAT1Q6PJG6 821 aa12□□□□□ -0.49
YBX3-217ENST00000546164 RHOT1Q8IXI2 618 aa12□□□□□ -0.49
YBX3-217ENST00000546164 TEX26Q8N6G2 289 aa12□□□□□ -0.49
YBX3-217ENST00000546164 FAM174AQ8TBP5 190 aa12□□□□□ -0.49
YBX3-217ENST00000546164 MAML1Q92585 1016 aa12□□□□□ -0.49
YBX3-217ENST00000546164 CALR3Q96L12 384 aaKnown RBP12□□□□□ -0.49
YBX3-217ENST00000546164 TSGA13Q96PP4 275 aa12□□□□□ -0.49
YBX3-217ENST00000546164 RNF157Q96PX1 679 aa12□□□□□ -0.49
YBX3-217ENST00000546164 MGME1Q9BQP7 344 aa12□□□□□ -0.49
YBX3-217ENST00000546164 C1QTNF2Q9BXJ5 285 aa12□□□□□ -0.49
YBX3-217ENST00000546164 SLC32A1Q9H598 525 aa12□□□□□ -0.49
YBX3-217ENST00000546164 ATP13A3Q9H7F0 1226 aa12□□□□□ -0.49
YBX3-217ENST00000546164 IL21RQ9HBE5 538 aa12□□□□□ -0.49
YBX3-217ENST00000546164 GDF3Q9NR23 364 aa12□□□□□ -0.49
YBX3-217ENST00000546164 TM7SF3Q9NS93 570 aa12□□□□□ -0.49
YBX3-217ENST00000546164 KLHL11Q9NVR0 708 aa12□□□□□ -0.49
YBX3-217ENST00000546164 ADAMTS9Q9P2N4 1935 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 A0A1B0GTQ1 180 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 MED19A0JLT2 244 aaPredicted RBP11.99□□□□□ -0.49
YBX3-217ENST00000546164 LRRD1A4D1F6 860 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 C3orf70A6NLC5 250 aaPredicted RBP11.99□□□□□ -0.49
YBX3-217ENST00000546164 BTNL10A8MVZ5 291 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 H0Y8X5 98 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 TRAFD1O14545 582 aaPredicted RBP11.99□□□□□ -0.49
YBX3-217ENST00000546164 SLC31A1O15431 190 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 PSTPIP1O43586 416 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 IPO7O95373 1038 aaKnown RBP11.99□□□□□ -0.49
YBX3-217ENST00000546164 ADRB1P08588 477 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 MX2P20592 715 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 COMTP21964 271 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 SERPINA4P29622 427 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 AKT2P31751 481 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 CCT8P50990 548 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 FGL2Q14314 439 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 ZNF235Q14590 738 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 STAT4Q14765 748 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 UGP2Q16851 508 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 SLC9A4Q6AI14 798 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 PSAPL1Q6NUJ1 521 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 C11orf63Q6NUN7 778 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 RAD9BQ6WBX8 426 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 ABI3BPQ7Z7G0 1075 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 TTC7BQ86TV6 843 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 TMEM139Q8IV31 216 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 BBS5Q8N3I7 341 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 OXR1Q8N573 874 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 DENND6BQ8NEG7 585 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 DEFB124Q8NES8 71 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 NSMCE1Q8WV22 266 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 LENG8Q96PV6 779 aaPredicted RBP11.99□□□□□ -0.49
YBX3-217ENST00000546164 NUDCD1Q96RS6 583 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 ELF4Q99607 663 aaPredicted RBP11.99□□□□□ -0.49
YBX3-217ENST00000546164 BAG1Q99933 345 aaPredicted RBP11.99□□□□□ -0.49
YBX3-217ENST00000546164 SLC17A9Q9BYT1 436 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 DDX56Q9NY93 547 aaKnown RBP11.99□□□□□ -0.49
YBX3-217ENST00000546164 REXO2Q9Y3B8 237 aaKnown RBP11.99□□□□□ -0.49
YBX3-217ENST00000546164 HS3ST3A1Q9Y663 406 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 ALG6Q9Y672 507 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 PLXNA2O75051 1894 aa11.99□□□□□ -0.49
YBX3-217ENST00000546164 TRPM6Q9BX84 2022 aa11.98□□□□□ -0.49
YBX3-217ENST00000546164 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.98□□□□□ -0.49
YBX3-217ENST00000546164 A0A1W2PQ67 120 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms