RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TANC1Q9C0D5 1861 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 RNF103-CHMP3A0A140T963 221 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 DLGAP1O14490 977 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 DCLK1O15075 740 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 PGK1P00558 417 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 AHSGP02765 367 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 KPNA2P52292 529 aaKnown RBP14.33□□□□□ -0.12
SRP54-202ENST00000546080 GSTM4Q03013 218 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 PSMD5Q16401 504 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 PPP1R3AQ16821 1122 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 UGP2Q16851 508 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 DCAF6Q58WW2 860 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 PITRM1Q5JRX3 1037 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 XKR5Q6UX68 686 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 HACD2Q6Y1H2 254 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 EPHX4Q8IUS5 362 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 CENPSQ8N2Z9 138 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 SHCBP1Q8NEM2 672 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 CYGBQ8WWM9 190 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 GPR78Q96P69 363 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 SLC39A3Q9BRY0 314 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 OSBPL2Q9H1P3 480 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 POLR1BQ9H9Y6 1135 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 CCM2LQ9NUG4 571 aaPredicted RBP14.33□□□□□ -0.12
SRP54-202ENST00000546080 SFMBT1Q9UHJ3 866 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 LOC285556D6RIA3 1793 aa14.33□□□□□ -0.12
SRP54-202ENST00000546080 A0A087WZ62 844 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 FAM95CA0A1B0GW59 222 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 TRIM64A6NGJ6 449 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 HCRTO43612 131 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 ARF4P18085 180 aaPredicted RBP14.32□□□□□ -0.12
SRP54-202ENST00000546080 NFKB1P19838 968 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 EDNRBP24530 442 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 ATP5F1P24539 256 aaPredicted RBP14.32□□□□□ -0.12
SRP54-202ENST00000546080 CD68P34810 354 aaPredicted RBP14.32□□□□□ -0.12
SRP54-202ENST00000546080 ETFBP38117 255 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 BCAP31P51572 246 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 DNAJB13P59910 316 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 C1QTNF8P60827 252 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 PITX1P78337 314 aaPredicted RBP14.32□□□□□ -0.12
SRP54-202ENST00000546080 CDH17Q12864 832 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 INPP5AQ14642 412 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 EML3Q32P44 896 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 SLC36A3Q495N2 470 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 FGD3Q5JSP0 725 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 C1QTNF12Q5T7M4 302 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 NBPF12Q5TAG4 269 aaPredicted RBP14.32□□□□□ -0.12
SRP54-202ENST00000546080 OGFOD2Q6N063 350 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 C8orf82Q6P1X6 216 aaPredicted RBP14.32□□□□□ -0.12
SRP54-202ENST00000546080 NT5DC4Q86YG4 428 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 CEP97Q8IW35 865 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 SIX6OS1Q8N1H7 587 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 MRPL57Q9BQC6 102 aaKnown RBP14.32□□□□□ -0.12
SRP54-202ENST00000546080 FDXACB1Q9BRP7 624 aaPredicted RBP14.32□□□□□ -0.12
SRP54-202ENST00000546080 C9orf16Q9BUW7 83 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 CCDC68Q9H2F9 335 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 EML4Q9HC35 981 aaKnown RBP14.32□□□□□ -0.12
SRP54-202ENST00000546080 UBP1Q9NZI7 540 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 DHRS12A0PJE2 317 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 SOWAHBA6NEL2 793 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 C19orf81C9J6K1 198 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 PPEF2O14830 753 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 XPOTO43592 962 aaKnown RBP14.32□□□□□ -0.12
SRP54-202ENST00000546080 ARIH2O95376 493 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 CD247P20963 164 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 IL10P22301 178 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 IGBP1P78318 339 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 MPP1Q00013 466 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 BNIP3Q12983 259 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 NME3Q13232 169 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 ATP1A4Q13733 1029 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 ABRAXAS1Q6UWZ7 409 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 UNC93AQ86WB7 457 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 NDRG1Q92597 394 aaKnown RBP14.32□□□□□ -0.12
SRP54-202ENST00000546080 SEPT8Q92599 483 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 ZUFSPQ96AP4 578 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 ELMO2Q96JJ3 720 aa14.32□□□□□ -0.12
SRP54-202ENST00000546080 GMPR2Q9P2T1 348 aaKnown RBP14.32□□□□□ -0.12
SRP54-202ENST00000546080 MTF2Q9Y483 593 aaPredicted RBP14.32□□□□□ -0.12
SRP54-202ENST00000546080 FAM149AA5PLN7 773 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 TRIM43BA6NCK2 446 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 NEMP2A6NFY4 417 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 K7EPI3 171 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 CLOCKO15516 846 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 HBP1O60381 514 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 TPST1O60507 370 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 DAB1O75553 588 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 FUCA1P04066 466 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 INHBBP09529 407 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 ERCC2P18074 760 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 FUT4P22083 530 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 FASP25445 335 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 PSMA4P25789 261 aaKnown RBP14.31□□□□□ -0.12
SRP54-202ENST00000546080 POLD2P49005 469 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 OXCT1P55809 520 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 CXCL9Q07325 125 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 MOGQ16653 247 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 OTUD1Q5VV17 481 aaPredicted RBP14.31□□□□□ -0.12
SRP54-202ENST00000546080 DCAF15Q66K64 600 aa14.31□□□□□ -0.12
SRP54-202ENST00000546080 NANOGP8Q6NSW7 305 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms