RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 TMPRSS6Q8IU80 811 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 MMAAQ8IVH4 418 aaKnown RBP10.88□□□□□ -0.67
PAAF1-216ENST00000546039 KLHDC8BQ8IXV7 354 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 DTWD2Q8NBA8 298 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 HCAR2Q8TDS4 363 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 HMGB4Q8WW32 186 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 PRCCQ92733 491 aaPredicted RBP10.88□□□□□ -0.67
PAAF1-216ENST00000546039 TADA1Q96BN2 335 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 LRRC45Q96CN5 670 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 SIPA1Q96FS4 1042 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 MRGPRX1Q96LB2 322 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 HHIPQ96QV1 700 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 RBM15Q96T37 977 aaKnown RBP eCLIP10.88□□□□□ -0.67
PAAF1-216ENST00000546039 KRT12Q99456 494 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 MKRN2Q9H000 416 aaKnown RBP10.88□□□□□ -0.67
PAAF1-216ENST00000546039 DYRK4Q9NR20 520 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 PRMT8Q9NR22 394 aaPredicted RBP10.88□□□□□ -0.67
PAAF1-216ENST00000546039 C2orf42Q9NWW7 574 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 BCCIPQ9P287 314 aaKnown RBP eCLIP10.88□□□□□ -0.67
PAAF1-216ENST00000546039 DKK3Q9UBP4 350 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 FAM153AQ9UHL3 310 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 AAR2Q9Y312 384 aaKnown RBP10.88□□□□□ -0.67
PAAF1-216ENST00000546039 TNRC6BQ9UPQ9 1833 aaKnown RBP10.88□□□□□ -0.67
PAAF1-216ENST00000546039 A0A0C4DFX4 3053 aa10.88□□□□□ -0.67
PAAF1-216ENST00000546039 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 TSPAN11A1L157 253 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 TTC24A2A3L6 582 aaPredicted RBP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 FAM86C2PA6NEL3 165 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 FAM187AA6NFU0 413 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 ERI2A8K979 691 aaKnown RBP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 KPNA3O00505 521 aaPredicted RBP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 MID1O15344 667 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 PSMD3O43242 534 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 HTRA2O43464 458 aaPredicted RBP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 GJB3O75712 270 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 CPP00450 1065 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 ACADMP11310 421 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 ETS1P14921 441 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 AVPR2P30518 371 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 HOXA6P31267 233 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 GKP32189 559 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 SLC8A1P32418 973 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 RPL22P35268 128 aaKnown RBP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 PTGIRP43119 386 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 TNNT3P45378 269 aaPredicted RBP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 CCDC15Q0P6D6 951 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 TRAF2Q12933 501 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 SEMA5AQ13591 1074 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 ZNF805Q5CZA5 627 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 ANO7Q6IWH7 933 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 BRAT1Q6PJG6 821 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 KDELC1Q6UW63 502 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 PRPF39Q86UA1 669 aaKnown RBP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 RASSF3Q86WH2 238 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 JAMLQ86YT9 394 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 PGBD3Q8N328 593 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 PAF1Q8N7H5 531 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 GLIS1Q8NBF1 620 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 SPATA22Q8NHS9 363 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 SPOCK2Q92563 424 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 VOPP1Q96AW1 172 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 ECHDC3Q96DC8 303 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 ERLEC1Q96DZ1 483 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 OXNAD1Q96HP4 312 aaPredicted RBP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 FEM1CQ96JP0 617 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 KLHL32Q96NJ5 620 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 GORASP1Q9BQQ3 440 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 C1QTNF1Q9BXJ1 281 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 TDRD1Q9BXT4 1180 aaKnown RBP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 PABPC3Q9H361 631 aaKnown RBP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 SUV39H2Q9H5I1 410 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 C11orf16Q9NQ32 467 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 POLR3BQ9NW08 1133 aaPredicted RBP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 ASIC3Q9UHC3 531 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 SARDHQ9UL12 918 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 NEU2Q9Y3R4 380 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 ARIH1Q9Y4X5 557 aaPredicted RBP10.87□□□□□ -0.67
PAAF1-216ENST00000546039 RAI2Q9Y5P3 530 aa10.87□□□□□ -0.67
PAAF1-216ENST00000546039 CUL9Q8IWT3 2517 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 CCDC163A0A0D9SF12 145 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 F5H423 210 aaPredicted RBP10.86□□□□□ -0.67
PAAF1-216ENST00000546039 K7ESF4 209 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 TRAFD1O14545 582 aaPredicted RBP10.86□□□□□ -0.67
PAAF1-216ENST00000546039 TTI1O43156 1089 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 PMPCBO75439 489 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 PGLSO95336 258 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 METTL18O95568 372 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 MT-CYBP00156 380 aaPredicted RBP10.86□□□□□ -0.67
PAAF1-216ENST00000546039 ZSCAN5DPP0CG00 497 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 NFKBIAP25963 317 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 VPS41P49754 854 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 SUOXP51687 545 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 NEK3P51956 506 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 NUBP1P53384 320 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 WNT3AP56704 352 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 RPL26P61254 145 aaKnown RBP10.86□□□□□ -0.67
PAAF1-216ENST00000546039 GPS1Q13098 491 aa10.86□□□□□ -0.67
PAAF1-216ENST00000546039 TRIP13Q15645 432 aaPredicted RBP10.86□□□□□ -0.67
PAAF1-216ENST00000546039 TMEM31Q5JXX7 168 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms