RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 Q6ZVU0 165 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 CCNJLQ8IV13 435 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 ZNF687Q8N1G0 1237 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 PDCD7Q8N8D1 485 aaKnown RBP16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 PTCD2Q8WV60 388 aaKnown RBP16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 SORCS1Q8WY21 1168 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 EZH1Q92800 747 aaPredicted RBP16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 ECHDC3Q96DC8 303 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 IFT43Q96FT9 208 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 FMO2Q99518 471 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 GORASP1Q9BQQ3 440 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 NAT9Q9BTE0 207 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 MLPHQ9BV36 600 aaPredicted RBP16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 TM6SF2Q9BZW4 377 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 TRIM31Q9BZY9 425 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 DPH5Q9H2P9 285 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 ZDHHC18Q9NUE0 388 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 IL36AQ9UHA7 158 aa16.18■□□□□ 0.18
PRPF40A-212ENST00000545856 TTC34A8MYJ7 566 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 FZD6O60353 706 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 SYNCRIPO60506 623 aaKnown RBP16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 MAGEA3P43357 314 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 RPS9P46781 194 aaKnown RBP16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 RGRP47804 291 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 GRIA4P48058 902 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 ZXDAP98168 799 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 SIGLEC14Q08ET2 396 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 HLTFQ14527 1009 aaKnown RBP eCLIP16.17■□□□□ 0.182e-7■■□□□ 14.1
PRPF40A-212ENST00000545856 DNAJC21Q5F1R6 531 aaKnown RBP16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 C9orf64Q5T6V5 341 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 ARMC12Q5T9G4 340 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 NAIF1Q69YI7 327 aaPredicted RBP16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 EMBQ6PCB8 327 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 RELL1Q8IUW5 271 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 RAVER1Q8IY67 606 aaKnown RBP16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 IL17RCQ8NAC3 791 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 PEX13Q92968 403 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 MRGPRX2Q96LB1 330 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 RBM15Q96T37 977 aaKnown RBP eCLIP16.17■□□□□ 0.181e-6■■□□□ 13.4
PRPF40A-212ENST00000545856 TBL1YQ9BQ87 522 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 HACD3Q9P035 362 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 HCN2Q9UL51 889 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 MMP17Q9ULZ9 603 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 RAI2Q9Y5P3 530 aa16.17■□□□□ 0.18
PRPF40A-212ENST00000545856 TRAFD1O14545 582 aaPredicted RBP16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 TP73O15350 636 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 ERLIN1O75477 346 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 TMEM63AO94886 807 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 MT-CYBP00156 380 aaPredicted RBP16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 ADH1BP00325 375 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 EPHX1P07099 455 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 CHRNB1P11230 501 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 NPY2RP49146 381 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 PLTPP55058 493 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 SLMAPQ14BN4 828 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 BRD3Q15059 726 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 HIF1AQ16665 826 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 CFAP58Q5T655 872 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 ZDHHC24Q6UX98 284 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 CENPUQ71F23 418 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 PRUNE1Q86TP1 453 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 RYBPQ8N488 228 aaPredicted RBP16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 IPMKQ8NFU5 416 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 SPATA22Q8NHS9 363 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 FBXO25Q8TCJ0 367 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 EXOC2Q96KP1 924 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 SERPINB12Q96P63 405 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 TRIB3Q96RU7 358 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 IL22Q9GZX6 179 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 TNKS2Q9H2K2 1166 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 TRABDQ9H4I3 376 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 SUV39H2Q9H5I1 410 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 CASS4Q9NQ75 786 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 BFARQ9NZS9 450 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 CA14Q9ULX7 337 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 PHTF1Q9UMS5 762 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 PPIL1Q9Y3C6 166 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 ACTL7AQ9Y615 435 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 WASF2Q9Y6W5 498 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 ATG2BQ96BY7 2078 aa16.16■□□□□ 0.18
PRPF40A-212ENST00000545856 ESYT3A0FGR9 886 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 MAGEB16A2A368 324 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 CCDC151A5D8V7 595 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 KRBA1A5PL33 1030 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 E7ESA3 106 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 RNF40O75150 1001 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 SIN3BO75182 1162 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 PMPCBO75439 489 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 PGLSO95336 258 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 PRKCHP24723 683 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 ITGB7P26010 798 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 TIE1P35590 1138 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 PDE1BQ01064 536 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 SLC1A5Q15758 541 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 ZNF805Q5CZA5 627 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 SPDYCQ5MJ68 293 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 ATXN7L2Q5T6C5 722 aaPredicted RBP16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 GDPD4Q6W3E5 623 aa16.15■□□□□ 0.18
PRPF40A-212ENST00000545856 CCNI2Q6ZMN8 369 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms