RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 ABL2P42684 1182 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 CDH6P55285 790 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 PDK2Q15119 407 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 TXNRD3NBQ6F5E7 133 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 BRAT1Q6PJG6 821 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 ABI3BPQ7Z7G0 1075 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 MAP7D3Q8IWC1 876 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 BBS5Q8N3I7 341 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 DENND6BQ8NEG7 585 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 SAP25Q8TEE9 199 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 TSC1Q92574 1164 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 KLK6Q92876 244 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 PSKH2Q96QS6 385 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 C1QTNF7Q9BXJ2 289 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 SUV39H2Q9H5I1 410 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 ATP13A3Q9H7F0 1226 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 SEPT3Q9UH03 358 aa23.53■■□□□ 1.36
CHFR-222ENST00000544093 COL5A1P20908 1838 aaPredicted RBP23.52■■□□□ 1.36
CHFR-222ENST00000544093 TSPAN11A1L157 253 aa23.52■■□□□ 1.36
CHFR-222ENST00000544093 EPHA8P29322 1005 aaPredicted RBP23.52■■□□□ 1.36
CHFR-222ENST00000544093 TBX2Q13207 712 aaPredicted RBP23.52■■□□□ 1.36
CHFR-222ENST00000544093 SRLQ86TD4 932 aa23.52■■□□□ 1.36
CHFR-222ENST00000544093 SPATS2Q86XZ4 545 aaKnown RBP23.52■■□□□ 1.36
CHFR-222ENST00000544093 RHOT2Q8IXI1 618 aa23.52■■□□□ 1.36
CHFR-222ENST00000544093 TSEN2Q8NCE0 465 aaKnown RBP23.52■■□□□ 1.36
CHFR-222ENST00000544093 NSMCE1Q8WV22 266 aa23.52■■□□□ 1.36
CHFR-222ENST00000544093 IFT43Q96FT9 208 aa23.52■■□□□ 1.36
CHFR-222ENST00000544093 CHP1Q99653 195 aa23.52■■□□□ 1.36
CHFR-222ENST00000544093 PACSIN1Q9BY11 444 aa23.52■■□□□ 1.36
CHFR-222ENST00000544093 WASF3Q9UPY6 502 aa23.52■■□□□ 1.36
CHFR-222ENST00000544093 FPGTO14772 594 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 TNFSF14O43557 240 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 PAK4O96013 591 aaPredicted RBP23.51■■□□□ 1.35
CHFR-222ENST00000544093 FTH1P19P0C7X4 201 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 ARHGAP25P42331 645 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 AP1S1P61966 158 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 IL9RQ01113 521 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 LBRQ14739 615 aaKnown RBP23.51■■□□□ 1.35
CHFR-222ENST00000544093 KYAT3Q6YP21 454 aaKnown RBP23.51■■□□□ 1.35
CHFR-222ENST00000544093 GCNT7Q6ZNI0 430 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 ATPAF2Q8N5M1 289 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 CXorf40AQ8TE69 158 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 MYOCQ99972 504 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 ZNF670Q9BS34 389 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 KLHL11Q9NVR0 708 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 INTUQ9ULD6 942 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 NEUROG3Q9Y4Z2 214 aa23.51■■□□□ 1.35
CHFR-222ENST00000544093 IGLON5A6NGN9 336 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 INSIG1O15503 277 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 TIMP2P16035 220 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 RABIFP47224 123 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 POLR2LP62875 67 aaKnown RBP23.5■■□□□ 1.35
CHFR-222ENST00000544093 ZNF235Q14590 738 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 SHBQ15464 509 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 UGP2Q16851 508 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 PRAMEF14Q5SWL7 426 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 ERAP2Q6P179 960 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 ARHGAP36Q6ZRI8 547 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 NETO2Q8NC67 525 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 KCTD6Q8NC69 237 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 ADAMTS14Q8WXS8 1223 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 FZD3Q9NPG1 666 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 FTSJ1Q9UET6 329 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 CA5BQ9Y2D0 317 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 BTBD3Q9Y2F9 522 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 ANKRD36A6QL64 1941 aa23.5■■□□□ 1.35
CHFR-222ENST00000544093 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.49■■□□□ 1.35
CHFR-222ENST00000544093 TOR1BO14657 336 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 SPINT1O43278 529 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 TM7SF2O76062 418 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 MTA2O94776 668 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 PIGNO95427 931 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 IL4RP24394 825 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 BCL2L1Q07817 233 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 FGL2Q14314 439 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 RALGPS1Q5JS13 557 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 RAB44Q7Z6P3 723 aaPredicted RBP23.49■■□□□ 1.35
CHFR-222ENST00000544093 SLC35G2Q8TBE7 412 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 CNTNAP3BQ96NU0 1288 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 SCNM1Q9BWG6 230 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 CALN1Q9BXU9 219 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 CNTNAP3Q9BZ76 1288 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 SPTLC3Q9NUV7 552 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 ETNK2Q9NVF9 386 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 ITM2BQ9Y287 266 aa23.49■■□□□ 1.35
CHFR-222ENST00000544093 A0A1W2PQ67 120 aa23.48■■□□□ 1.35
CHFR-222ENST00000544093 ARSEP51690 589 aa23.48■■□□□ 1.35
CHFR-222ENST00000544093 DPYSL3Q14195 570 aa23.48■■□□□ 1.35
CHFR-222ENST00000544093 TMEM52BQ4KMG9 183 aa23.48■■□□□ 1.35
CHFR-222ENST00000544093 Q6ZSR6 202 aa23.48■■□□□ 1.35
CHFR-222ENST00000544093 PTAR1Q7Z6K3 402 aaPredicted RBP23.48■■□□□ 1.35
CHFR-222ENST00000544093 GATAD2AQ86YP4 633 aa23.48■■□□□ 1.35
CHFR-222ENST00000544093 OR13H1Q8NG92 308 aa23.48■■□□□ 1.35
CHFR-222ENST00000544093 RFFLQ8WZ73 363 aa23.48■■□□□ 1.35
CHFR-222ENST00000544093 KLF6Q99612 283 aaPredicted RBP23.48■■□□□ 1.35
CHFR-222ENST00000544093 GPR27Q9NS67 375 aa23.48■■□□□ 1.35
CHFR-222ENST00000544093 HAUS2Q9NVX0 235 aa23.48■■□□□ 1.35
CHFR-222ENST00000544093 GGT7Q9UJ14 662 aa23.48■■□□□ 1.35
CHFR-222ENST00000544093 MAFKO60675 156 aa23.47■■□□□ 1.35
CHFR-222ENST00000544093 NFKBIAP25963 317 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms