RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 UVRAGQ9P2Y5 699 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 GPR55Q9Y2T6 319 aaPredicted RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 NDUFS3O75489 264 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 SLITRK3O94933 977 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 VCLP18206 1134 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 GALP22466 123 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 SRP54P61011 504 aaKnown RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 SWI5Q1ZZU3 235 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 TCP11X2Q5H9J9 407 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 DACT2Q5SW24 774 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ZDHHC20Q5W0Z9 365 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 FBXO42Q6P3S6 717 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 C5orf46Q6UWT4 87 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 HTR3DQ70Z44 454 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 CYP2U1Q7Z449 544 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 KBTBD6Q86V97 674 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 AP2M1Q96CW1 435 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 NGLY1Q96IV0 654 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 TGS1Q96RS0 853 aaKnown RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 RANBP9Q96S59 729 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ASCC2Q9H1I8 757 aaPredicted RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 PRMT8Q9NR22 394 aaPredicted RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 DENND3A2RUS2 1198 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 MED7O43513 233 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 CAMTA2O94983 1202 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 POMCP01189 267 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ITGB1P05556 798 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 PFKMP08237 780 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ACADMP11310 421 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 CYP3A5P20815 502 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ARSEP51690 589 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ERVK-25P63136 954 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 DEFA6Q01524 100 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 TDGQ13569 410 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 KRT31Q15323 416 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 USF2Q15853 346 aaPredicted RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 IQCCQ4KMZ1 466 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 PKN3Q6P5Z2 889 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 CCDC137Q6PK04 289 aaKnown RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 IGF2-ASQ6U949 168 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 FAM109AQ8N4B1 249 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ARFGAP1Q8N6T3 406 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 PLD5Q8N7P1 536 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ENDOVQ8N8Q3 282 aaKnown RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ZNF507Q8TCN5 953 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 OXER1Q8TDS5 423 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 SLC20A1Q8WUM9 679 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 SNX33Q8WV41 574 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ADAMTS14Q8WXS8 1223 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 KIAA1191Q96A73 305 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 TOE1Q96GM8 510 aaKnown RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 DCUN1D5Q9BTE7 237 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ERVK-6Q9BXR3 956 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 PRRG3Q9BZD7 231 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 TRMT13Q9NUP7 481 aaKnown RBP8.97□□□□□ -0.97
VPS13D-212ENST00000543766 ERVK-18Q9QC07 812 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 TNFRSF10DQ9UBN6 386 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 POFUT2Q9Y2G5 429 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 VWA7Q9Y334 891 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 PTCH2Q9Y6C5 1203 aa8.97□□□□□ -0.97
VPS13D-212ENST00000543766 SBF2Q86WG5 1849 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 SMIM31A0A1B0GVY4 71 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 FAM221AA4D161 298 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 WBP4O75554 376 aaKnown RBP8.96□□□□□ -0.97
VPS13D-212ENST00000543766 LY86O95711 162 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 DPYDQ12882 1025 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 CFAP77Q6ZQR2 320 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 BRINP3Q76B58 766 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 LIX1LQ8IVB5 337 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 ADSSL1Q8N142 457 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 LHFPL5Q8TAF8 219 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 SPPL3Q8TCT6 385 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 CASKIN2Q8WXE0 1202 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 ZNF486Q96H40 463 aaPredicted RBP8.96□□□□□ -0.97
VPS13D-212ENST00000543766 PPM1MQ96MI6 270 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 QRFPRQ96P65 431 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 SLC4A9Q96Q91 983 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 WDR77Q9BQA1 342 aaPredicted RBP8.96□□□□□ -0.97
VPS13D-212ENST00000543766 GSDMCQ9BYG8 508 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 UCK1Q9HA47 277 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 THG1LQ9NWX6 298 aaKnown RBP8.96□□□□□ -0.97
VPS13D-212ENST00000543766 CYP39A1Q9NYL5 469 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 MAGED2Q9UNF1 606 aaPredicted RBP8.96□□□□□ -0.97
VPS13D-212ENST00000543766 TRPV2Q9Y5S1 764 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 EP400Q96L91 3159 aa8.96□□□□□ -0.97
VPS13D-212ENST00000543766 hCG_1807616A0A1W2PRN6 198 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 TRIM77I1YAP6 450 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 DIRAS3O95661 229 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 MAT2AP31153 395 aaKnown RBP8.96□□□□□ -0.98
VPS13D-212ENST00000543766 OR3A3P47888 321 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 OCRLQ01968 901 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 CHRNDQ07001 517 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 ILF3Q12906 894 aaKnown RBP eCLIP8.96□□□□□ -0.98
VPS13D-212ENST00000543766 GRB10Q13322 594 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 MEDAGQ5VYS4 303 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 IQSEC1Q6DN90 963 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 RTL4Q6ZR62 310 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 ATG16L2Q8NAA4 619 aa8.96□□□□□ -0.98
VPS13D-212ENST00000543766 ZNF398Q8TD17 642 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms