RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 SLC10A2Q12908 348 aaPredicted RBP18.09■□□□□ 0.49
TSFM-208ENST00000543727 POM121L1PQ3SYA9 428 aa18.09■□□□□ 0.49
TSFM-208ENST00000543727 SETMARQ53H47 684 aaPredicted RBP18.09■□□□□ 0.49
TSFM-208ENST00000543727 TRIM61Q5EBN2 209 aa18.09■□□□□ 0.49
TSFM-208ENST00000543727 CFAP58Q5T655 872 aa18.09■□□□□ 0.49
TSFM-208ENST00000543727 TBC1D3GQ6DHY5 549 aa18.09■□□□□ 0.49
TSFM-208ENST00000543727 TBC1D3CQ6IPX1 549 aa18.09■□□□□ 0.49
TSFM-208ENST00000543727 PRPF39Q86UA1 669 aaKnown RBP18.09■□□□□ 0.49
TSFM-208ENST00000543727 TBC1D3Q8IZP1 549 aaPredicted RBP18.09■□□□□ 0.49
TSFM-208ENST00000543727 DEFB119Q8N690 84 aa18.09■□□□□ 0.49
TSFM-208ENST00000543727 CCNYQ8ND76 341 aa18.09■□□□□ 0.49
TSFM-208ENST00000543727 KLHL32Q96NJ5 620 aa18.09■□□□□ 0.49
TSFM-208ENST00000543727 ZDHHC5Q9C0B5 715 aa18.09■□□□□ 0.49
TSFM-208ENST00000543727 POLR1EQ9GZS1 481 aaKnown RBP18.09■□□□□ 0.49
TSFM-208ENST00000543727 SUV39H2Q9H5I1 410 aa18.09■□□□□ 0.49
TSFM-208ENST00000543727 TMEM74BQ9NUR3 256 aa18.09■□□□□ 0.49
TSFM-208ENST00000543727 SLC6A14Q9UN76 642 aa18.09■□□□□ 0.49
TSFM-208ENST00000543727 PTPRZ1P23471 2315 aaPredicted RBP18.08■□□□□ 0.48
TSFM-208ENST00000543727 FAM47DPA6NHR8 397 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 RNGTTO60942 597 aaKnown RBP18.08■□□□□ 0.48
TSFM-208ENST00000543727 NEBLO76041 1014 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 SYPP08247 313 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 NFKBIAP25963 317 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 SCNN1BP51168 640 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 AFF3P51826 1226 aaKnown RBP18.08■□□□□ 0.48
TSFM-208ENST00000543727 LIMK1P53667 647 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 POLR2LP62875 67 aaKnown RBP18.08■□□□□ 0.48
TSFM-208ENST00000543727 IFI35P80217 286 aaPredicted RBP18.08■□□□□ 0.48
TSFM-208ENST00000543727 BCL2L1Q07817 233 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 ELP6Q0PNE2 266 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 BBS12Q6ZW61 710 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 C1orf216Q8TAB5 229 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 SNX19Q92543 992 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 P3H4Q92791 437 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 ECHDC3Q96DC8 303 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 HES6Q96HZ4 224 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 CAPN10Q9HC96 672 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 SCUBE2Q9NQ36 999 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 EIF2B4Q9UI10 523 aaKnown RBP18.08■□□□□ 0.48
TSFM-208ENST00000543727 GUCA1BQ9UMX6 200 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 FADS3Q9Y5Q0 445 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 CAPN6Q9Y6Q1 641 aa18.08■□□□□ 0.48
TSFM-208ENST00000543727 ATXN2Q99700 1313 aaKnown RBP18.07■□□□□ 0.48
TSFM-208ENST00000543727 DOCK9Q9BZ29 2069 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 LRRK1Q38SD2 2015 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 HACD1B0YJ81 288 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 APOC4-APOC2K7ER74 178 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 PLK4O00444 970 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 TJP3O95049 919 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 APOC2P02655 101 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 CA4P22748 312 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 GKP32189 559 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 RGRP47804 291 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 GRIA4P48058 902 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 RPS21P63220 83 aaKnown RBP18.07■□□□□ 0.48
TSFM-208ENST00000543727 RACK1P63244 317 aaKnown RBP18.07■□□□□ 0.48
TSFM-208ENST00000543727 GSE1Q14687 1217 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 TEAD4Q15561 434 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 HORMAD1Q86X24 394 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 KIAA2013Q8IYS2 634 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 TRIM58Q8NG06 486 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 FAM174AQ8TBP5 190 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 SKA1Q96BD8 255 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 FEM1CQ96JP0 617 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 MIR1-1HGQ9H1L0 117 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 PPP2R2CQ9Y2T4 447 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 ADAMTS9Q9P2N4 1935 aa18.07■□□□□ 0.48
TSFM-208ENST00000543727 A0A0U1RQJ8 604 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 LNP1A1A4G5 178 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 AREL1O15033 823 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 MUSKO15146 869 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 INSIG1O15503 277 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 HTRA2O43464 458 aaPredicted RBP18.06■□□□□ 0.48
TSFM-208ENST00000543727 PTMAP06454 111 aaKnown RBP18.06■□□□□ 0.48
TSFM-208ENST00000543727 KRT10P13645 584 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 XPAP23025 273 aaPredicted RBP18.06■□□□□ 0.48
TSFM-208ENST00000543727 DYNLT1P63172 113 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 OVGP1Q12889 678 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 XRCC4Q13426 336 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 UGP2Q16851 508 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 AASDHQ4L235 1098 aaPredicted RBP18.06■□□□□ 0.48
TSFM-208ENST00000543727 SLC45A4Q5BKX6 768 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 KAZNQ674X7 775 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 TTC7BQ86TV6 843 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 PGBD5Q8N414 524 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 ZCCHC9Q8N567 271 aaKnown RBP18.06■□□□□ 0.48
TSFM-208ENST00000543727 NETO1Q8TDF5 533 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 TFB1MQ8WVM0 346 aaKnown RBP18.06■□□□□ 0.48
TSFM-208ENST00000543727 ASB12Q8WXK4 309 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 ALG3Q92685 438 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 LGMNQ99538 433 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 IL12RB2Q99665 862 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 FERMT1Q9BQL6 677 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 ORAI3Q9BRQ5 295 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 OSBPL8Q9BZF1 889 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 NT5MQ9NPB1 228 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 RBM22Q9NW64 420 aaKnown RBP eCLIP18.06■□□□□ 0.48
TSFM-208ENST00000543727 WDR87Q6ZQQ6 2873 aa18.06■□□□□ 0.48
TSFM-208ENST00000543727 UPK3BL1B0FP48 263 aa18.05■□□□□ 0.48
TSFM-208ENST00000543727 UPK3BL2E5RIL1 263 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms