RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 ANKRD11Q6UB99 2663 aaPredicted RBP12.2□□□□□ -0.46
PTPN6-220ENST00000543115 ANKRD62A6NC57 917 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 NEMP2A6NFY4 417 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 LRRC53A6NM62 1247 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 J3KR12 359 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 OPA1O60313 960 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 BRINP1O60477 761 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 TM7SF2O76062 418 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 JUNDP17535 347 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 TNFAIP3P21580 790 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 AIF1P55008 147 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 E2F1Q01094 437 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 KLHL40Q2TBA0 621 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 DEFB133Q30KQ1 61 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 PARP15Q460N3 678 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 ANO6Q4KMQ2 910 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 CDCP2Q5VXM1 449 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 TP53I13Q8NBR0 393 aaPredicted RBP12.2□□□□□ -0.46
PTPN6-220ENST00000543115 ARHGEF26Q96DR7 871 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 CELF6Q96J87 481 aaKnown RBP12.2□□□□□ -0.46
PTPN6-220ENST00000543115 WRAP53Q9BUR4 548 aaKnown RBP12.2□□□□□ -0.46
PTPN6-220ENST00000543115 DUSP23Q9BVJ7 150 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 TRIM7Q9C029 511 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
PTPN6-220ENST00000543115 DKK3Q9UBP4 350 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 IPO11Q9UI26 975 aaKnown RBP12.2□□□□□ -0.46
PTPN6-220ENST00000543115 AP4E1Q9UPM8 1137 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 COQ6Q9Y2Z9 468 aa12.2□□□□□ -0.46
PTPN6-220ENST00000543115 GOLGA6L22H0YM25 854 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 H3BM21 787 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 FGF10O15520 208 aaPredicted RBP12.19□□□□□ -0.46
PTPN6-220ENST00000543115 AQP9O43315 295 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 GCATO75600 419 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 MBD3O95983 291 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 CCDC172P0C7W6 258 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 PSMA2P25787 234 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 ABCG1P45844 678 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 RGRP47804 291 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 TPI1P60174 286 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 RAD51Q06609 339 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 C1orf61Q13536 156 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 PLEKHA7Q6IQ23 1121 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 ZCCHC8Q6NZY4 707 aaKnown RBP12.19□□□□□ -0.46
PTPN6-220ENST00000543115 GUSBP11Q6P575 273 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 NYAP1Q6ZVC0 841 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 CYP4V2Q6ZWL3 525 aaPredicted RBP12.19□□□□□ -0.46
PTPN6-220ENST00000543115 ZNF571Q7Z3V5 609 aaPredicted RBP12.19□□□□□ -0.46
PTPN6-220ENST00000543115 ZSWIM9Q86XI8 627 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 SNIP1Q8TAD8 396 aaKnown RBP12.19□□□□□ -0.46
PTPN6-220ENST00000543115 IFI44Q8TCB0 444 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 LMX1AQ8TE12 382 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 CXorf40AQ8TE69 158 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 VCPIP1Q96JH7 1222 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 SNRNP25Q9BV90 132 aaKnown RBP12.19□□□□□ -0.46
PTPN6-220ENST00000543115 CPEB1Q9BZB8 566 aaKnown RBP12.19□□□□□ -0.46
PTPN6-220ENST00000543115 SLC39A8Q9C0K1 460 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 DHX35Q9H5Z1 703 aaKnown RBP12.19□□□□□ -0.46
PTPN6-220ENST00000543115 HAUS4Q9H6D7 363 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 UBA2Q9UBT2 640 aaPredicted RBP12.19□□□□□ -0.46
PTPN6-220ENST00000543115 PCSK1NQ9UHG2 260 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 MYO6Q9UM54 1294 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 CSNK1G3Q9Y6M4 447 aa12.19□□□□□ -0.46
PTPN6-220ENST00000543115 ARID1BQ8NFD5 2236 aaPredicted RBP12.18□□□□□ -0.46
PTPN6-220ENST00000543115 TSPAN11A1L157 253 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 TMEM191CA6NGB0 347 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 EEF2KO00418 725 aaKnown RBP12.18□□□□□ -0.46
PTPN6-220ENST00000543115 CASC3O15234 703 aaKnown RBP12.18□□□□□ -0.46
PTPN6-220ENST00000543115 BUB1BO60566 1050 aaPredicted RBP12.18□□□□□ -0.46
PTPN6-220ENST00000543115 PRAMEF11O60813 436 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 PRKCGP05129 697 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 GP1BAP07359 652 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 TGM2P21980 687 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 EIF4A3P38919 411 aaKnown RBP12.18□□□□□ -0.46
PTPN6-220ENST00000543115 PAPOLAP51003 745 aaKnown RBP12.18□□□□□ -0.46
PTPN6-220ENST00000543115 NDST2P52849 883 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 THOP1P52888 689 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 IRF4Q15306 451 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 CDKN3Q16667 212 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 UGP2Q16851 508 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 TMEM52BQ4KMG9 183 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 CRTC1Q6UUV9 634 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 ARHGAP36Q6ZRI8 547 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 ARHGAP12Q8IWW6 846 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 PHACTR4Q8IZ21 702 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 NPWQ8N729 165 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 NAP1L5Q96NT1 182 aaPredicted RBP12.18□□□□□ -0.46
PTPN6-220ENST00000543115 KCTD15Q96SI1 283 aaPredicted RBP12.18□□□□□ -0.46
PTPN6-220ENST00000543115 NCAPGQ9BPX3 1015 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 BPIFA3Q9BQP9 254 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 LRRC61Q9BV99 259 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 CLPBQ9H078 707 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 SUV39H2Q9H5I1 410 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 PARVAQ9NVD7 372 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 APOBEC3BQ9UH17 382 aaKnown RBP12.18□□□□□ -0.46
PTPN6-220ENST00000543115 RAI2Q9Y5P3 530 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 APC2O95996 2303 aa12.18□□□□□ -0.46
PTPN6-220ENST00000543115 DSPP15924 2871 aaKnown RBP12.17□□□□□ -0.46
PTPN6-220ENST00000543115 ITPR1Q14643 2758 aa12.17□□□□□ -0.46
PTPN6-220ENST00000543115 TRPM6Q9BX84 2022 aa12.17□□□□□ -0.46
PTPN6-220ENST00000543115 CPED1A4D0V7 1026 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms