RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 TTLL3Q9Y4R7 772 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 ABCA7Q8IZY2 2146 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 TSPAN11A1L157 253 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 LRRC72A6NJI9 287 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 TRAFD1O14545 582 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 PLRG1O43660 514 aaKnown RBP17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 SOCS5O75159 536 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 FGGP02679 453 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 ADRB3P13945 408 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 TAS2R38P59533 333 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 NIPAL4Q0D2K0 466 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 FBXL19Q6PCT2 694 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 TMEFF1Q8IYR6 380 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 RASGEF1CQ8N431 466 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 OR2T34Q8NGX1 318 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 RAB7BQ96AH8 199 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 ECHDC3Q96DC8 303 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 OSBPL9Q96SU4 736 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 C10orf88Q9H8K7 445 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 NUMA1Q14980 2115 aa17.28■□□□□ 0.36
RABGGTA-203ENST00000543002 CES2O00748 559 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 HTRA2O43464 458 aaPredicted RBP17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 IHHQ14623 411 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 SIX1Q15475 284 aaPredicted RBP17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 LPAL2Q16609 132 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 LONRF2Q1L5Z9 754 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 FAM182AQ5T1J6 154 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 CFAP58Q5T655 872 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 BRAT1Q6PJG6 821 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 DEFB119Q8N690 84 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 ATG4AQ8WYN0 398 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 SPOCK2Q92563 424 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 FOXJ1Q92949 421 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 NKD2Q969F2 451 aaPredicted RBP17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 SLC25A51Q9H1U9 297 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 C6orf106Q9H6K1 298 aaPredicted RBP17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 USP29Q9HBJ7 922 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 GLOD4Q9HC38 313 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 KLHL8Q9P2G9 620 aaPredicted RBP17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 TRHDEQ9UKU6 1024 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 DNPEPQ9ULA0 475 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 TTC7AQ9ULT0 858 aaPredicted RBP17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 ZKSCAN5Q9Y2L8 839 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 PCDHGC4Q9Y5F7 938 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 SPAG17Q6Q759 2223 aa17.27■□□□□ 0.36
RABGGTA-203ENST00000543002 A0A1W2PQ67 120 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 FAM47DPA6NHR8 397 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 METTL12A8MUP2 240 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 C10orf142B7Z368 130 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 KCNN4O15554 427 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 AP1G1O43747 822 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 LIASO43766 372 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 LMNAP02545 664 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 MMP2P08253 660 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 SERPINF2P08697 491 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 TIMP2P16035 220 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 TCP1P17987 556 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 ABL2P42684 1182 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 DHPSP49366 369 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 SUOXP51687 545 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 TRAF2Q12933 501 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 PAPD7Q5XG87 772 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 KIAA0895LQ68EN5 471 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 LAIR1Q6GTX8 287 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 PID1Q7Z2X4 250 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 TTC7BQ86TV6 843 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 ZSWIM9Q86XI8 627 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 SLC41A1Q8IVJ1 513 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 ZNF567Q8N184 647 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 COG1Q8WTW3 980 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 C1orf54Q8WWF1 131 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 IMP4Q96G21 291 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 LOXL4Q96JB6 756 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 NAPGQ99747 312 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 PREBQ9HCU5 417 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 FADS3Q9Y5Q0 445 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 THADAQ6YHU6 1953 aa17.26■□□□□ 0.35
RABGGTA-203ENST00000543002 TBC1D3DA0A087WVF3 549 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 TBC1D3IA0A087WXS9 549 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 TBC1D3EA0A087X179 549 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 TBC1D3KA0A087X1G2 549 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 CTAGE9A4FU28 777 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 CFAP69A5D8W1 941 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 TBC1D3FA6NER0 549 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 UPK3BL1B0FP48 263 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 TBC1D3LB9A6J9 549 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 UPK3BL2E5RIL1 263 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 AREL1O15033 823 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 STK10O94804 968 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 TBC1D3HP0C7X1 549 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 PRLRP16471 622 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 CD68P34810 354 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 CD86P42081 329 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 PTGER3P43115 390 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 POLR2LP62875 67 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 SKOR1P84550 965 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 OASLQ15646 514 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms