RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MTX3Q5HYI7 312 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 DDX53Q86TM3 631 aaKnown RBP16.24■□□□□ 0.19
VARS2-212ENST00000542001 MYO1HQ8N1T3 1032 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 TMEM40Q8WWA1 233 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 PSMG2Q969U7 264 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 DCUN1D1Q96GG9 259 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 PPP1R10Q96QC0 940 aaKnown RBP16.24■□□□□ 0.19
VARS2-212ENST00000542001 HNRNPABQ99729 332 aaKnown RBP16.24■□□□□ 0.19
VARS2-212ENST00000542001 TRMT13Q9NUP7 481 aaKnown RBP16.24■□□□□ 0.19
VARS2-212ENST00000542001 VWA7Q9Y334 891 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 SH3BP1Q9Y3L3 701 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 PCDHGC4Q9Y5F7 938 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 RFPL1O75677 317 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 SNAI1O95863 264 aaPredicted RBP16.24■□□□□ 0.19
VARS2-212ENST00000542001 ALBP02768 609 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 AFF1P51825 1210 aaKnown RBP16.24■□□□□ 0.19
VARS2-212ENST00000542001 LIMK2P53671 638 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 FOLH1Q04609 750 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 CCDC15Q0P6D6 951 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 PKN3Q6P5Z2 889 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 SPNS2Q8IVW8 549 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 HGH1Q9BTY7 390 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 TRIM54Q9BYV2 358 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 SLC39A8Q9C0K1 460 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 EBF3Q9H4W6 596 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 AGO3Q9H9G7 860 aaKnown RBP16.24■□□□□ 0.19
VARS2-212ENST00000542001 TAS2R13Q9NYV9 303 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 PKD2L2Q9NZM6 624 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 GIMAP2Q9UG22 337 aa16.24■□□□□ 0.19
VARS2-212ENST00000542001 TLR5O60602 858 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 TSHRP16473 764 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 TRAF2Q12933 501 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 BOP1Q14137 746 aaKnown RBP16.23■□□□□ 0.19
VARS2-212ENST00000542001 PGS1Q32NB8 556 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 C6orf52Q5T4I8 152 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 STK32CQ86UX6 486 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 TOP6BLQ8N6T0 577 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 OR7D4Q8NG98 312 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 RIN3Q8TB24 985 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 SLC7A6OSQ96CW6 309 aaPredicted RBP16.23■□□□□ 0.19
VARS2-212ENST00000542001 PTGES3LE9PB15 166 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 DLDP09622 509 aaKnown RBP16.23■□□□□ 0.19
VARS2-212ENST00000542001 ZBTB17Q13105 803 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 FRMD7Q6ZUT3 714 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 FAM126BQ8IXS8 530 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 MIPEPQ99797 713 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 TRPM5Q9NZQ8 1165 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 SLCO1B7G3V0H7 640 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 SIX3O95343 332 aaPredicted RBP16.23■□□□□ 0.19
VARS2-212ENST00000542001 ZNF682O95780 498 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 FAM58BPP0C7Q3 252 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 RGS4P49798 205 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 AQP4P55087 323 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 HEXDCQ8WVB3 486 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 CCDC126Q96EE4 140 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 POLR1EQ9GZS1 481 aaKnown RBP16.23■□□□□ 0.19
VARS2-212ENST00000542001 ACTR8Q9H981 624 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 AP4S1Q9Y587 144 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 PCDHB9Q9Y5E1 797 aa16.23■□□□□ 0.19
VARS2-212ENST00000542001 N4BP2Q86UW6 1770 aaPredicted RBP16.22■□□□□ 0.19
VARS2-212ENST00000542001 CLASP2O75122 1294 aaKnown RBP16.22■□□□□ 0.19
VARS2-212ENST00000542001 CABYRO75952 493 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 HDCP19113 662 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 CES1P23141 567 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 MOGSQ13724 837 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 TCEA2Q15560 299 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 TIGD2Q4W5G0 525 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 IL27RAQ6UWB1 636 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 MAGEE2Q8TD90 523 aaPredicted RBP16.22■□□□□ 0.19
VARS2-212ENST00000542001 DENND1AQ8TEH3 1009 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 APBB2Q92870 758 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 RERGLQ9H628 205 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 POMPQ9Y244 141 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 CRTAMO95727 393 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 ASGR1P07306 291 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 PRKAR2AP13861 404 aaKnown RBP16.22■□□□□ 0.19
VARS2-212ENST00000542001 DET1Q7L5Y6 550 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 CUZD1Q86UP6 607 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 FBXO30Q8TB52 745 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 TMEM209Q96SK2 561 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 FBXO44Q9H4M3 255 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 S100A14Q9HCY8 104 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 RIC8BQ9NVN3 520 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 KCTD3Q9Y597 815 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 SORBS2O94875 1100 aaKnown RBP16.22■□□□□ 0.19
VARS2-212ENST00000542001 GPR15P49685 360 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 ARHGDIAP52565 204 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 DYNC1I2Q13409 638 aaKnown RBP16.22■□□□□ 0.19
VARS2-212ENST00000542001 SH3D19Q5HYK7 790 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 LZTR1Q8N653 840 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 C16orf70Q9BSU1 422 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 NOL11Q9H8H0 719 aaKnown RBP16.22■□□□□ 0.19
VARS2-212ENST00000542001 EBF2Q9HAK2 575 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 RRN3Q9NYV6 651 aa16.22■□□□□ 0.19
VARS2-212ENST00000542001 DAB2P98082 770 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 VPS26BQ4G0F5 336 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 CLVS1Q8IUQ0 354 aaPredicted RBP16.21■□□□□ 0.19
VARS2-212ENST00000542001 FBXW8Q8N3Y1 598 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 OR4K2Q8NGD2 314 aa16.21■□□□□ 0.19
VARS2-212ENST00000542001 OR9I1Q8NGQ6 314 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms