RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 GYPCP04921 128 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 SNRPAP09012 282 aaKnown RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 POU5F1Q01860 360 aaKnown RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 RAB33AQ14088 237 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 MAPRE2Q15555 327 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 UPP1Q16831 310 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 BEND6Q5SZJ8 279 aaPredicted RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 TMPRSS6Q8IU80 811 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 ZNF398Q8TD17 642 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 C9orf72Q96LT7 481 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 OSBPL1AQ9BXW6 950 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 RSPH9Q9H1X1 276 aaPredicted RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 PPARGC1AQ9UBK2 798 aaKnown RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 PSMD13Q9UNM6 376 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 RGPD2P0DJD1 1756 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 BTN3A1O00481 513 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 RPP40O75818 363 aaKnown RBP8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 C4BPAP04003 597 aaKnown RBP8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 NFKB1P19838 968 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 CMPK1P30085 196 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 COILP38432 576 aaPredicted RBP8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 SPAM1P38567 509 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 AVPR1BP47901 424 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 DAOAP59103 153 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 OC90Q02509 493 aaPredicted RBP8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 FUT2Q10981 343 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 LONRF1Q17RB8 773 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 ALG11Q2TAA5 492 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 GALNTL6Q49A17 601 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 C9orf50Q5SZB4 431 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 SLC9B2Q86UD5 537 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 CXorf38Q8TB03 319 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 JSRP1Q96MG2 331 aaPredicted RBP8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 COLQQ9Y215 455 aaPredicted RBP8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 TLR6Q9Y2C9 796 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 EVPLLA8MZ36 301 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 RBP1P09455 135 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 KRT4P19013 534 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 ATXN7L2Q5T6C5 722 aaPredicted RBP8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 ZNF248Q8NDW4 579 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 NCSTNQ92542 709 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 TTLL2Q9BWV7 592 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 Q9H521 79 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 MTRRQ9UBK8 725 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 SNX12Q9UMY4 172 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 HCFC2Q9Y5Z7 792 aa8.71□□□□□ -1.01
FNDC3A-206ENST00000541916 A0A087X0B3 334 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 UQCRBP14927 111 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 NTSP30990 170 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 MC4RP32245 332 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 PBX2P40425 430 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 MAGEA11P43364 429 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 DSG1Q02413 1049 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 GNA13Q14344 377 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 PARP6Q2NL67 630 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 RTP2Q5QGT7 225 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 STRADAQ7RTN6 431 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 LRRC46Q96FV0 321 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 PRRX2Q99811 253 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 PBX4Q9BYU1 374 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 AVENQ9NQS1 362 aaPredicted RBP8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 C9IYK1 514 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 NBNO60934 754 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 ATG7O95352 703 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 FGF1P05230 155 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 RARAP10276 462 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 ESRRAP11474 423 aaPredicted RBP8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 VARSP26640 1264 aaKnown RBP8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 ADRA1BP35368 520 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 ALDH18A1P54886 795 aaKnown RBP8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 IL2P60568 153 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 PLGLB1Q02325 96 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 ACAP2Q15057 778 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 MLF2Q15773 248 aaPredicted RBP8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 KCNMB4Q86W47 210 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 TC2NQ8N9U0 490 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 CASKIN2Q8WXE0 1202 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 KCNS3Q9BQ31 491 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 SORCS3Q9UPU3 1222 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 NPC1O15118 1278 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 USP12O75317 370 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 CPSF4O95639 269 aaKnown RBP8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 MGAT1P26572 445 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 HTR7P34969 479 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 GLRBP48167 497 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 RPS24P62847 133 aaKnown RBP8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 ANKRD20A4Q4UJ75 823 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 ATP13A4Q4VNC1 1196 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 ANKRD20A2Q5SQ80 823 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 ANKRD20A1Q5TYW2 823 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 HOMEZQ8IX15 550 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 CDX2Q99626 313 aaPredicted RBP8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 ACAT2Q9BWD1 397 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 FOXP3Q9BZS1 431 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 TEKT2Q9UIF3 430 aa8.71□□□□□ -1.02
FNDC3A-206ENST00000541916 LZTS1Q9Y250 596 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms