RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 GGCXP38435 758 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 NNMTP40261 264 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 NOP2P46087 812 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 HCAR3P49019 387 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 STK19P49842 368 aaPredicted RBP8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 ECT2LQ008S8 904 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 KIF5AQ12840 1032 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 ZNF211Q13398 564 aaPredicted RBP8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 DPYSL2Q16555 572 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 IFI16Q16666 785 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 FSCBQ5H9T9 825 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 FAM72AQ5TYM5 149 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 LRRC38Q5VT99 294 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 FAM72DQ6L9T8 149 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 C11orf63Q6NUN7 778 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 POLNQ7Z5Q5 900 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 SETD3Q86TU7 594 aaPredicted RBP8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 FAM72BQ86X60 149 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 CCAR2Q8N163 923 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 PYROXD2Q8N2H3 581 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 SLC25A45Q8N413 288 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 TPCN2Q8NHX9 752 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 FAM71BQ8TC56 605 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 TTC9Q92623 222 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 KLK6Q92876 244 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 TBC1D31Q96DN5 1066 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 MED8Q96G25 268 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 PPP1R9BQ96SB3 815 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 FAM129BQ96TA1 746 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 EPAS1Q99814 870 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 DESI2Q9BSY9 194 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 TSGA10Q9BZW7 698 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 FAM117AQ9C073 453 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 DHX35Q9H5Z1 703 aaKnown RBP8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 THSD1Q9NS62 852 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 UCKL1Q9NWZ5 548 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 DONSONQ9NYP3 566 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 ZNF212Q9UDV6 495 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 SALL4Q9UJQ4 1053 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 TFR2Q9UP52 801 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 NEU3Q9UQ49 428 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 TBC1D30Q9Y2I9 924 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 HEMK1Q9Y5R4 338 aaPredicted RBP8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 SNX10Q9Y5X0 201 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 DUSP10Q9Y6W6 482 aa8.86□□□□□ -0.99
CLSTN3-212ENST00000541770 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 SLC31A1O15431 190 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 FGF10O15520 208 aaPredicted RBP8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 KRT86O43790 486 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 BNIP3LO60238 219 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 OPA1O60313 960 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 CNTN5O94779 1100 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 PTMAP06454 111 aaKnown RBP8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 CCDC175P0C221 793 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 THEGLP0DJG4 465 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 RARAP10276 462 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 ALPPL2P10696 532 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 VAV1P15498 845 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 RHOQP17081 205 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 DGKAP23743 735 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 EPHB2P29323 1055 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 RBMS1P29558 406 aaKnown RBP8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 MAPKAPK2P49137 400 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 IRAK1P51617 712 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 PLK1P53350 603 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 METAP1P53582 386 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 ERVPABLB-1P60509 514 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 NFATC3Q12968 1075 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 ZNF177Q13360 481 aaPredicted RBP8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 CA9Q16790 459 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 ACCSLQ4AC99 568 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 SETMARQ53H47 684 aaPredicted RBP8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 ALFQ53S48 1182 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 C6orf132Q5T0Z8 1188 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 TXNRD3NBQ6F5E7 133 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 CXorf57Q6NSI4 855 aaKnown RBP8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 ZNF783Q6ZMS7 281 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 NLRP14Q86W24 1093 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 CIR1Q86X95 450 aaPredicted RBP8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 VSIG1Q86XK7 387 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 APCDD1Q8J025 514 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 RNF10Q8N5U6 811 aaKnown RBP8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 OR4C6Q8NH72 309 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 MAPK15Q8TD08 544 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 UBE2Q2Q8WVN8 375 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 PTPRN2Q92932 1015 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 HIC2Q96JB3 615 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 APOLD1Q96LR9 279 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 KCTD15Q96SI1 283 aaPredicted RBP8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 CALN1Q9BXU9 219 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 MAGEB5Q9BZ81 275 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 DPH1Q9BZG8 443 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 CATSPERBQ9H7T0 1116 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 CAAP1Q9H8G2 361 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 ZWILCHQ9H900 591 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 POLR1BQ9H9Y6 1135 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 TMEM248Q9NWD8 314 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 GPATCH2LQ9NWQ4 482 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 MPP6Q9NZW5 540 aa8.85□□□□□ -0.99
CLSTN3-212ENST00000541770 RCOR3Q9P2K3 495 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms