RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 HSP90AB1P08238 724 aaKnown RBP4.46□□□□□ -1.7
SNHG1-217ENST00000541578 PKMP14618 531 aaKnown RBP4.46□□□□□ -1.7
SNHG1-217ENST00000541578 SAT1P21673 171 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 EIF2DP41214 584 aaKnown RBP4.46□□□□□ -1.7
SNHG1-217ENST00000541578 VPS41P49754 854 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 MVDP53602 400 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 FOXL2P58012 376 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 CFHR3Q02985 330 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 STK4Q13043 487 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 IL13RA2Q14627 380 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 LARS2Q15031 903 aaKnown RBP4.46□□□□□ -1.7
SNHG1-217ENST00000541578 RASA2Q15283 850 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 PRICKLE4Q2TBC4 344 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 AP5B1Q2VPB7 878 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 EDRF1Q3B7T1 1238 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 PXDC1Q5TGL8 231 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 CDC73Q6P1J9 531 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 VSTM1Q6UX27 236 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 RANBP10Q6VN20 620 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 GALNT7Q86SF2 657 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 BRSK2Q8IWQ3 736 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 SCN4BQ8IWT1 228 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 C16orf71Q8IYS4 520 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-217ENST00000541578 RAB40AQ8WXH6 277 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 ARHGEF2Q92974 986 aaKnown RBP4.46□□□□□ -1.7
SNHG1-217ENST00000541578 FAM149B1Q96BN6 582 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 PRR11Q96HE9 360 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-217ENST00000541578 FCRL4Q96PJ5 515 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 NPAS1Q99742 590 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 NCAPGQ9BPX3 1015 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.46□□□□□ -1.74e-59■■■□□ 16.1
SNHG1-217ENST00000541578 RNF26Q9BY78 433 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-217ENST00000541578 SLC32A1Q9H598 525 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 SH3GLB2Q9NR46 395 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 ABHD10Q9NUJ1 306 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 MTMR4Q9NYA4 1195 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 ZHX1Q9UKY1 873 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-217ENST00000541578 HEMK1Q9Y5R4 338 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-217ENST00000541578 ZNF521Q96K83 1311 aa4.46□□□□□ -1.7
SNHG1-217ENST00000541578 PLXNC1O60486 1568 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 SCAF11Q99590 1463 aaKnown RBP4.45□□□□□ -1.7
SNHG1-217ENST00000541578 FAM237BA0A1B0GVD1 139 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 FAM90A7PA6NKC0 464 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 LRRC53A6NM62 1247 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 FAM90A22PA8MWA6 464 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 FAM90A12PA8MX19 464 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 FAM90A23PA8MXZ1 464 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 CLIC1O00299 241 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 PPEF2O14830 753 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 BEST1O76090 585 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 CBX6O95503 412 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 MLYCDO95822 493 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 TOP3BO95985 862 aaKnown RBP4.45□□□□□ -1.7
SNHG1-217ENST00000541578 CHRM4P08173 479 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 CLTBP09497 229 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 ALDOCP09972 364 aaKnown RBP4.45□□□□□ -1.7
SNHG1-217ENST00000541578 HOXB9P17482 250 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-217ENST00000541578 MCCP23508 829 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 PRPH2P23942 346 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 ATP5F1P24539 256 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-217ENST00000541578 MAPK4P31152 587 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 PSMB10P40306 273 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 RGS2P41220 211 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 SKIV2L2P42285 1042 aaKnown RBP4.45□□□□□ -1.7
SNHG1-217ENST00000541578 AGTR2P50052 363 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 SLC37A1P57057 533 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 WDR5P61964 334 aaKnown RBP4.45□□□□□ -1.7
SNHG1-217ENST00000541578 GPC5P78333 572 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 B4GALNT1Q00973 533 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 GHRHRQ02643 423 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 BECN1Q14457 450 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 KCNB1Q14721 858 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 GSTA3Q16772 222 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 DPCR1Q3MIW9 517 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 DUSP28Q4G0W2 176 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 SLC9B1Q4ZJI4 515 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 SH2D4BQ5SQS7 431 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 CC2D1BQ5T0F9 858 aaKnown RBP4.45□□□□□ -1.7
SNHG1-217ENST00000541578 NAA16Q6N069 864 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-217ENST00000541578 TMEM81Q6P7N7 255 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 KRT74Q7RTS7 529 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 TMEM200AQ86VY9 491 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 C11orf65Q8NCR3 313 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 HSPH1Q92598 858 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 EDC3Q96F86 508 aaKnown RBP4.45□□□□□ -1.7
SNHG1-217ENST00000541578 CMTM3Q96MX0 182 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 ZMAT2Q96NC0 199 aaKnown RBP4.45□□□□□ -1.7
SNHG1-217ENST00000541578 TMEM79Q9BSE2 394 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 HDHD5Q9BXW7 423 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 CADM1Q9BY67 442 aaKnown RBP4.45□□□□□ -1.7
SNHG1-217ENST00000541578 TXLNGYQ9BZA5 131 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 SIL1Q9H173 461 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 RSPH9Q9H1X1 276 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-217ENST00000541578 ENTPD7Q9NQZ7 604 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 PLSCR4Q9NRQ2 329 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 RRP7BPQ9NSQ0 103 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 ASNSD1Q9NWL6 643 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 BABAM1Q9NWV8 329 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 MAFFQ9ULX9 164 aa4.45□□□□□ -1.7
SNHG1-217ENST00000541578 SLC8A2Q9UPR5 921 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms