RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ADCY4Q8NFM4 1077 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 USP33Q8TEY7 942 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 HEXDCQ8WVB3 486 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 MRGPRX2Q96LB1 330 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 ABHD16BQ9H3Z7 469 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 MRM3Q9HC36 420 aaKnown RBP9.64□□□□□ -0.87
CNOT4-212ENST00000541284 ATP13A1Q9HD20 1204 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 ETAA1Q9NY74 926 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 CD300AQ9UGN4 299 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 TCAF1Q9Y4C2 921 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 SMIM31A0A1B0GVY4 71 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 UBFD1O14562 309 aaKnown RBP9.64□□□□□ -0.87
CNOT4-212ENST00000541284 HDCP19113 662 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 PFKPQ01813 784 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 MFSD10Q14728 455 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 PPP2R5DQ14738 602 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 POU6F1Q14863 301 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 AP1ARQ63HQ0 302 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 NAPEPLDQ6IQ20 393 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 ZFP1Q6P2D0 407 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 RANBP10Q6VN20 620 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 PDZD4Q76G19 769 aaPredicted RBP9.64□□□□□ -0.87
CNOT4-212ENST00000541284 AHI1Q8N157 1196 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 DUS3LQ96G46 650 aaKnown RBP9.64□□□□□ -0.87
CNOT4-212ENST00000541284 MED10Q9BTT4 135 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 OSER1Q9NX31 292 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 NSMCE4AQ9NXX6 385 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 CLIC5Q9NZA1 410 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 MID2Q9UJV3 735 aa9.64□□□□□ -0.87
CNOT4-212ENST00000541284 MICAL3Q7RTP6 2002 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 KCNU1A8MYU2 1149 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 SLCO1B7G3V0H7 640 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 HLA-DQB2P05538 268 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 SLC10A3P09131 477 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 CCNCP24863 283 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 POLD2P49005 469 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 CLCNKBP51801 687 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 RPS6KA3P51812 740 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 PPP1R3AQ16821 1122 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 MYLK3Q32MK0 819 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 NADK2Q4G0N4 442 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 NOMO2Q5JPE7 1267 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 C6orf52Q5T4I8 152 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 RASIP1Q5U651 963 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 IL23RQ5VWK5 629 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 BTBD8Q5XKL5 378 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 HMBOX1Q6NT76 420 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 TMEM207Q6UWW9 146 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 SETD3Q86TU7 594 aaPredicted RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 SCML4Q8N228 414 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 FAM110BQ8TC76 370 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 DQX1Q8TE96 717 aaKnown RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 UHRF1Q96T88 793 aaPredicted RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 TSPYL2Q9H2G4 693 aaPredicted RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 NOL6Q9H6R4 1146 aaKnown RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 WDCPQ9H6R7 721 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 MEAF6Q9HAF1 191 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 GLOD4Q9HC38 313 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 ACOT9Q9Y305 439 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 E7ENX8 843 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 XPOTO43592 962 aaKnown RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 ENO3P13929 434 aaPredicted RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 ME2P23368 584 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 DNAJB2P25686 324 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 CLCN2P51788 898 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 CRYBB1P53674 252 aaPredicted RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 MGAT5BQ3V5L5 792 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 SH2D4BQ5SQS7 431 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 HHIPL1Q96JK4 782 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 NDNQ99608 321 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 SLC39A8Q9C0K1 460 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 MRPL46Q9H2W6 279 aaKnown RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 UTP6Q9NYH9 597 aaKnown RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 PLK2Q9NYY3 685 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 GMPR2Q9P2T1 348 aaKnown RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 CNOT11Q9UKZ1 510 aaKnown RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 LZTS1Q9Y250 596 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 PTCH2Q9Y6C5 1203 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 HNRNPLP14866 589 aaKnown RBP eCLIP9.63□□□□□ -0.871e-5■■■□□ 17.9
CNOT4-212ENST00000541284 SAT1P21673 171 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 KCNC1P48547 511 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 ZNF135P52742 658 aaPredicted RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 INHBCP55103 352 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 FAM171BQ6P995 826 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 TRAF7Q6Q0C0 670 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 KDELC1Q6UW63 502 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 TRIM67Q6ZTA4 783 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 SPATA24Q86W54 205 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 ASB9Q96DX5 294 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 UBXN10Q96LJ8 280 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 EPAS1Q99814 870 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 FICDQ9BVA6 458 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 CACNA2D2Q9NY47 1150 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 RRN3Q9NYV6 651 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 SUCOQ9UBS9 1254 aaKnown RBP9.63□□□□□ -0.87
CNOT4-212ENST00000541284 TLK1Q9UKI8 766 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 AK5Q9Y6K8 562 aa9.63□□□□□ -0.87
CNOT4-212ENST00000541284 HELZP42694 1942 aaKnown RBP9.62□□□□□ -0.87
CNOT4-212ENST00000541284 PRORSD1PA6NEY8 169 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms