RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	FAM58BP	P0C7Q3	252 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FSHR	P23945	695 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PRKCH	P24723	683 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	L1CAM	P32004	1257 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MAGEA11	P43364	429 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SERPINB8	P50452	374 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF132	P52740	706 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MTTP	P55157	894 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ST8SIA6	P61647	398 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HTRA4	P83105	476 aa	Predicted RBP	5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CBX3	Q13185	183 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PCLAF	Q15004	111 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NOMO1	Q15155	1222 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ANKDD1A	Q495B1	522 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TMEM198	Q66K66	360 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PLD5	Q8N7P1	536 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MYLPF	Q96A32	169 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	BTBD9	Q96Q07	612 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DCUN1D5	Q9BTE7	237 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RBM38	Q9H0Z9	239 aa	Known RBP	5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783		Q9H521	79 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	THEG	Q9P2T0	379 aa		5.74	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CHAD	O15335	359 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PLIN3	O60664	434 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SPAG6	O75602	509 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TNFAIP8	O95379	198 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CCDC166	P0CW27	439 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RALB	P11234	206 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PIM1	P11309	404 aa	Predicted RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	LCP1	P13796	627 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NPR3	P17342	541 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ACAT1	P24752	427 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	EPHA3	P29320	983 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TKT	P29401	623 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ETFB	P38117	255 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GABRB2	P47870	512 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CLDN10	P78369	228 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RAD51	Q06609	339 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	C16orf72	Q14CZ0	275 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CA9	Q16790	459 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	UPP1	Q16831	310 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HSP90AA5P	Q58FG0	334 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NXN	Q6DKJ4	435 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ITPRIPL1	Q6GPH6	555 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PQLC3	Q8N755	202 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MRPL43	Q8N983	215 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ANKRD52	Q8NB46	1076 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CMAS	Q8NFW8	434 aa	Predicted RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SIGLEC10	Q96LC7	697 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KCNK16	Q96T55	309 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CCT7	Q99832	543 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MRPS26	Q9BYN8	205 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PBX4	Q9BYU1	374 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KLC2	Q9H0B6	622 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	VRTN	Q9H8Y1	702 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GOLGA2P5	Q9HBQ8	144 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HMGXB4	Q9UGU5	601 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	COLQ	Q9Y215	455 aa	Predicted RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CEPT1	Q9Y6K0	416 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PTPRF	P10586	1907 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DLL1	O00548	723 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CASQ2	O14958	399 aa	Predicted RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	BIRC5	O15392	142 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DENR	O43583	198 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TBC1D4	O60343	1298 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	COQ9	O75208	318 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HSPA4L	O95757	839 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SERPINE1	P05121	402 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PDGFRA	P16234	1089 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TSHR	P16473	764 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PFKL	P17858	780 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SAT1	P21673	171 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	BDNF	P23560	247 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TYK2	P29597	1187 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RGS7	P49802	495 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ENTPD1	P49961	510 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GATM	P50440	423 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	XIAP	P98170	497 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	OLIG2	Q13516	323 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CCDC85B	Q15834	202 aa	Predicted RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NAPRT	Q6XQN6	538 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ARC	Q7LC44	396 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FAM35A	Q86V20	835 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	XYLT1	Q86Y38	959 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF280B	Q86YH2	543 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NIPA2	Q8N8Q9	360 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RCN3	Q96D15	328 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TMA16	Q96EY4	203 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KLHL5	Q96PQ7	755 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TWNK	Q96RR1	684 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	EBNA1BP2	Q99848	306 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	C17orf80	Q9BSJ5	609 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PNPLA8	Q9NP80	782 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CXXC1	Q9P0U4	656 aa	Predicted RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PAK5	Q9P286	719 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF180	Q9UJW8	692 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CNTN6	Q9UQ52	1028 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DMTF1	Q9Y222	760 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PCDHGA4	Q9Y5G9	962 aa		5.73	□□□□□ -1.49

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