RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 PTPN3P26045 913 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 ATP5OP48047 213 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 CCNHP51946 323 aaPredicted RBP16.92■□□□□ 0.3
UBC-208ENST00000540700 GDF10P55107 478 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 GEMIN4P57678 1058 aaKnown RBP16.92■□□□□ 0.3
UBC-208ENST00000540700 HNRNPDQ14103 355 aaKnown RBP16.92■□□□□ 0.3
UBC-208ENST00000540700 RFTN1Q14699 578 aaPredicted RBP16.92■□□□□ 0.3
UBC-208ENST00000540700 CARD16Q5EG05 197 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 TIGD7Q6NT04 549 aaPredicted RBP16.92■□□□□ 0.3
UBC-208ENST00000540700 ARMCX6Q7L4S7 300 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 CACUL1Q86Y37 369 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 PCDH20Q8N6Y1 951 aaKnown RBP16.92■□□□□ 0.3
UBC-208ENST00000540700 CASKIN2Q8WXE0 1202 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 PSKH2Q96QS6 385 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 MGME1Q9BQP7 344 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 CINPQ9BW66 212 aaPredicted RBP16.92■□□□□ 0.3
UBC-208ENST00000540700 AP1M1Q9BXS5 423 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 NT5MQ9NPB1 228 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 SEPT10Q9P0V9 454 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 SUN2Q9UH99 717 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 WASF2Q9Y6W5 498 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 GON4LQ3T8J9 2241 aa16.92■□□□□ 0.3
UBC-208ENST00000540700 ASCC3Q8N3C0 2202 aaKnown RBP16.92■□□□□ 0.3
UBC-208ENST00000540700 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
UBC-208ENST00000540700 HACD1B0YJ81 288 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 PGRMC1O00264 195 aaKnown RBP16.91■□□□□ 0.3
UBC-208ENST00000540700 MCF2LO15068 1137 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 GSRP00390 522 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 C7P10643 843 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 CD68P34810 354 aaPredicted RBP16.91■□□□□ 0.3
UBC-208ENST00000540700 NNMTP40261 264 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 MMP13P45452 471 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 RHOAP61586 193 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 ZNF33AQ06730 810 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 NIPAL4Q0D2K0 466 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 SNX1Q13596 522 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 TRIM61Q5EBN2 209 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 MARC1Q5VT66 337 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 SDE2Q6IQ49 451 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 TTC27Q6P3X3 843 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 BZW1Q7L1Q6 419 aaKnown RBP16.91■□□□□ 0.3
UBC-208ENST00000540700 C11orf74Q86VG3 221 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 MDGA1Q8NFP4 955 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 OR2AP1Q8NGE2 309 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 OR2T3Q8NH03 318 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 BRD8Q9H0E9 1235 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 SLC32A1Q9H598 525 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 RBM22Q9NW64 420 aaKnown RBP eCLIP16.91■□□□□ 0.31e-37■■■■■ 52.3
UBC-208ENST00000540700 SEPT3Q9UH03 358 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 EVLQ9UI08 416 aaPredicted RBP16.91■□□□□ 0.3
UBC-208ENST00000540700 ATP8A1Q9Y2Q0 1164 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 NEUROG3Q9Y4Z2 214 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 SHROOM3Q8TF72 1996 aa16.91■□□□□ 0.3
UBC-208ENST00000540700 SYNCRIPO60506 623 aaKnown RBP16.9■□□□□ 0.3
UBC-208ENST00000540700 KCNJ1P48048 391 aa16.9■□□□□ 0.3
UBC-208ENST00000540700 RPS14P62263 151 aaKnown RBP16.9■□□□□ 0.3
UBC-208ENST00000540700 SIM1P81133 766 aaPredicted RBP16.9■□□□□ 0.3
UBC-208ENST00000540700 DARS2Q6PI48 645 aaKnown RBP16.9■□□□□ 0.3
UBC-208ENST00000540700 PRUNE1Q86TP1 453 aa16.9■□□□□ 0.3
UBC-208ENST00000540700 ZNF567Q8N184 647 aa16.9■□□□□ 0.3
UBC-208ENST00000540700 TTC13Q8NBP0 860 aa16.9■□□□□ 0.3
UBC-208ENST00000540700 ARRDC2Q8TBH0 407 aa16.9■□□□□ 0.3
UBC-208ENST00000540700 HTR3CQ8WXA8 447 aa16.9■□□□□ 0.3
UBC-208ENST00000540700 RLN3Q8WXF3 142 aa16.9■□□□□ 0.3
UBC-208ENST00000540700 MRGPRX1Q96LB2 322 aa16.9■□□□□ 0.3
UBC-208ENST00000540700 TMEM121Q9BTD3 319 aa16.9■□□□□ 0.3
UBC-208ENST00000540700 RSPH9Q9H1X1 276 aaPredicted RBP16.9■□□□□ 0.3
UBC-208ENST00000540700 HECAQ9UBI9 543 aaPredicted RBP16.9■□□□□ 0.3
UBC-208ENST00000540700 LAMA5O15230 3695 aa16.9■□□□□ 0.3
UBC-208ENST00000540700 FLNBO75369 2602 aaKnown RBP16.9■□□□□ 0.3
UBC-208ENST00000540700 PLK4O00444 970 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 KCNN4O15554 427 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 ZBTB24O43167 697 aaPredicted RBP16.89■□□□□ 0.29
UBC-208ENST00000540700 MAP3K13O43283 966 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 PIGNO95427 931 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 MMP2P08253 660 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 CHRNA3P32297 505 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 RENBPP51606 427 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 DSC2Q02487 901 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 ELAVL3Q14576 367 aaKnown RBP16.89■□□□□ 0.29
UBC-208ENST00000540700 ZNF235Q14590 738 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 STARD3Q14849 445 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 E2F5Q15329 346 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 CCNG2Q16589 344 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 MYLK3Q32MK0 819 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 POM121L1PQ3SYA9 428 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 TEX44Q53QW1 395 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 ALG1LQ6GMV1 187 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 RASSF3Q86WH2 238 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 TMPRSS6Q8IU80 811 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 MMAAQ8IVH4 418 aaKnown RBP16.89■□□□□ 0.29
UBC-208ENST00000540700 CDKL3Q8IVW4 592 aaPredicted RBP16.89■□□□□ 0.29
UBC-208ENST00000540700 PLPP6Q8IY26 295 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.89■□□□□ 0.29
UBC-208ENST00000540700 GLIS1Q8NBF1 620 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 GRIN3AQ8TCU5 1115 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 HMGB4Q8WW32 186 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 AGAP3Q96P47 875 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 GORASP1Q9BQQ3 440 aa16.89■□□□□ 0.29
UBC-208ENST00000540700 NUSAP1Q9BXS6 441 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms