RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 RELL1Q8IUW5 271 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 LRRC49Q8IUZ0 686 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 PPIL6Q8IXY8 311 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 CCDC13Q8IYE1 715 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 ZBTB44Q8NCP5 570 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 CCDC110Q8TBZ0 833 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 HMCESQ96FZ2 354 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 RPL10LQ96L21 214 aaKnown RBP10.75□□□□□ -0.69
ATL3-204ENST00000540699 HHIPQ96QV1 700 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 PHACTR1Q9C0D0 580 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 SLC39A8Q9C0K1 460 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 PDFQ9HBH1 243 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 POLMQ9NP87 494 aaPredicted RBP10.75□□□□□ -0.69
ATL3-204ENST00000540699 ZSCAN32Q9NX65 697 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 SUN2Q9UH99 717 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 SLC25A13Q9UJS0 675 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 RALGAPA1Q6GYQ0 2036 aa10.75□□□□□ -0.69
ATL3-204ENST00000540699 EDDM13A0A1B0GTR0 161 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 ARHGAP42A6NI28 874 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 TTC34A8MYJ7 566 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 RNF103O00237 685 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 CBX4O00257 560 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 MTSS1O43312 755 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 MAFKO60675 156 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 OPHN1O60890 802 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 METTL18O95568 372 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 MT-CO1P00395 513 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 HLA-EP13747 358 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 SDHBP21912 280 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 CCNCP24863 283 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 HSD17B3P37058 310 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 NNMTP40261 264 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 SERPINH1P50454 418 aaKnown RBP10.74□□□□□ -0.69
ATL3-204ENST00000540699 COPAP53621 1224 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 GEMIN4P57678 1058 aaKnown RBP10.74□□□□□ -0.69
ATL3-204ENST00000540699 IFI35P80217 286 aaPredicted RBP10.74□□□□□ -0.69
ATL3-204ENST00000540699 DHX9Q08211 1270 aaKnown RBP10.74□□□□□ -0.69
ATL3-204ENST00000540699 ZBTB17Q13105 803 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 SEMA5AQ13591 1074 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 STARD3Q14849 445 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 NUMA1Q14980 2115 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 SLMAPQ14BN4 828 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 DLG2Q15700 870 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 ANKRD20A2Q5SQ80 823 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 C9orf64Q5T6V5 341 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 ANKRD20A1Q5TYW2 823 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 ANKRD20A3Q5VUR7 823 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 IL31Q6EBC2 164 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 TSSK4Q6SA08 328 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 METTL3Q86U44 580 aaKnown RBP10.74□□□□□ -0.69
ATL3-204ENST00000540699 WDR5BQ86VZ2 330 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 ABCA7Q8IZY2 2146 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 IQCKQ8N0W5 287 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 ZNF567Q8N184 647 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 CCNYQ8ND76 341 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 TSTD1Q8NFU3 115 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 PTPRN2Q92932 1015 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 FATE1Q969F0 183 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 ISG20Q96AZ6 181 aaKnown RBP10.74□□□□□ -0.69
ATL3-204ENST00000540699 PWWP2AQ96N64 755 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 SPON2Q9BUD6 331 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 CEP44Q9C0F1 390 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 TSPYL1Q9H0U9 437 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 PRSS16Q9NQE7 514 aa10.74□□□□□ -0.69
ATL3-204ENST00000540699 SMG5Q9UPR3 1016 aaKnown RBP10.74□□□□□ -0.69
ATL3-204ENST00000540699 LAMA1P25391 3075 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 TNRC6BQ9UPQ9 1833 aaKnown RBP10.73□□□□□ -0.69
ATL3-204ENST00000540699 TCRBV21S2A2A0A5A6 115 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 E7ESA3 106 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 K7ERQ8 282 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 AGPSO00116 658 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 KCNK1O00180 336 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 ALOX15BO15296 676 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 SMAD6O43541 496 aaKnown RBP10.73□□□□□ -0.69
ATL3-204ENST00000540699 PRAMEF11O60813 436 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 SIN3BO75182 1162 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 ZNF821O75541 412 aaPredicted RBP10.73□□□□□ -0.69
ATL3-204ENST00000540699 KRT37O76014 449 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 ALDH1A2O94788 518 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 PEX11BO96011 259 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 EPHX1P07099 455 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 GABRG2P18507 467 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 TPSB2P20231 275 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 KCNA4P22459 653 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 CD68P34810 354 aaPredicted RBP10.73□□□□□ -0.69
ATL3-204ENST00000540699 ACTN2P35609 894 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 FDFT1P37268 417 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 NUMBP49757 651 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 PAPOLAP51003 745 aaKnown RBP10.73□□□□□ -0.69
ATL3-204ENST00000540699 BASP1P80723 227 aaKnown RBP10.73□□□□□ -0.69
ATL3-204ENST00000540699 IL10RBQ08334 325 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 DMWDQ09019 674 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 TPSAB1Q15661 275 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 TEX44Q53QW1 395 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 INO80DQ53TQ3 878 aaPredicted RBP10.73□□□□□ -0.69
ATL3-204ENST00000540699 C22orf39Q6P5X5 142 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 LINGO4Q6UY18 593 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 MTERF4Q7Z6M4 381 aaKnown RBP10.73□□□□□ -0.69
ATL3-204ENST00000540699 LONP2Q86WA8 852 aa10.73□□□□□ -0.69
ATL3-204ENST00000540699 KLHDC8BQ8IXV7 354 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms