RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 SYN2Q92777 582 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 AZIN2Q96A70 460 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 MYEOVQ96EZ4 313 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 C11orf70Q9BRQ4 267 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 RAB6CQ9H0N0 254 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 SYNCQ9H7C4 482 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 ANLNQ9NQW6 1124 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 ADAM22Q9P0K1 906 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 TLR6Q9Y2C9 796 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 LUC7L2Q9Y383 392 aaKnown RBP9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 F8P00451 2351 aa9.05□□□□□ -0.96
TRAPPC1-202ENST00000540486 OTOGQ6ZRI0 2925 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 CRYBG3Q68DQ2 2970 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 CPED1A4D0V7 1026 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 TMCO5BA8MYB1 307 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 GOLGA8SH3BPF8 625 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 I6L893 689 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 M0QYT0 321 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 MTSS1O43312 755 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 CBFA2T2O43439 604 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 ACSL4O60488 711 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 VPS4BO75351 444 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 DAB1O75553 588 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 POLR2EP19388 210 aaKnown RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 C5AR1P21730 350 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 VARSP26640 1264 aaKnown RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 HNRNPH3P31942 346 aaKnown RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 RFC1P35251 1148 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 UGT1A5P35504 534 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 NSFP46459 744 aaKnown RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 SGSHP51688 502 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 GSCP56915 257 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 ST8SIA6P61647 398 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 CDK17Q00537 523 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 KLHL30Q0D2K2 578 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 TBX2Q13207 712 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 ARID5BQ14865 1188 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 HNRNPA1L2Q32P51 320 aaKnown RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 ARTNQ5T4W7 220 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 FAM102AQ5T9C2 384 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 PIK3R6Q5UE93 754 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 MBLAC2Q68D91 279 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 SPECC1LQ69YQ0 1117 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 RFWD3Q6PCD5 774 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 MON1BQ7L1V2 547 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 RAB11FIP2Q7L804 512 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 ARCQ7LC44 396 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 EFL1Q7Z2Z2 1120 aaKnown RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 BNIPLQ7Z465 357 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 BPHLQ86WA6 291 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 MMAAQ8IVH4 418 aaKnown RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 UNC45BQ8IWX7 931 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 MCOLN2Q8IZK6 566 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 EMC1Q8N766 993 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 C9orf43Q8TAL5 461 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 TMA16Q96EY4 203 aaKnown RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 MRGPRX2Q96LB1 330 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 SERPINB11Q96P15 392 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 CATSPER2Q96P56 530 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 TRIM62Q9BVG3 475 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 SLC12A9Q9BXP2 914 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 IRX2Q9BZI1 471 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 STRADBQ9C0K7 418 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 SEPT11Q9NVA2 429 aaKnown RBP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 SALL4Q9UJQ4 1053 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 VPS4AQ9UN37 437 aa9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRAPPC1-202ENST00000540486 MED13Q9UHV7 2174 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 SYNJ2BP-COX16A0A087WUM0 186 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 A1L4Q6 167 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 TARSL2A2RTX5 802 aaKnown RBP9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 C2CD4BA6NLJ0 364 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 SIGLEC16A6NMB1 481 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 SIAH2O43255 324 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 SIN3BO75182 1162 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 ENDOD1O94919 500 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 LATS1O95835 1130 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 FTLP02792 175 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 SERPING1P05155 500 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 TPM3P06753 285 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 PABPC1P11940 636 aaKnown RBP9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 KRT3P12035 628 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 GZMAP12544 262 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 WT1P19544 449 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 RRM1P23921 792 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 CD82P27701 267 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 HOXD9P28356 352 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 GRNP28799 593 aaKnown RBP9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 CXCR3P49682 368 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 PDX1P52945 283 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 ADKP55263 362 aaKnown RBP9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 HNRNPKP61978 463 aaKnown RBP eCLIP9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 RPL7AP62424 266 aaKnown RBP9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 PPP2CBP62714 309 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 PPP2CAP67775 309 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 KLRB1Q12918 225 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 NME3Q13232 169 aa9.03□□□□□ -0.96
TRAPPC1-202ENST00000540486 SPIDRQ14159 915 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms