RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	CEP295	Q9C0D2	2601 aa		12.46	□□□□□ -0.42
CLTCL1-205	ENST00000538828	COL5A1	P20908	1838 aa	Predicted RBP	12.46	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TP53BP1	Q12888	1972 aa	Predicted RBP	12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TMEM131	Q92545	1883 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828		H0Y8X5	98 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	RNF103	O00237	685 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	RIOK3	O14730	519 aa	Known RBP	12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SH3BP5	O60239	455 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MAFK	O60675	156 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CDK4	P11802	303 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TCF4	P15884	667 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	AMPD1	P23109	780 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CES1	P23141	567 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	POLR2L	P62875	67 aa	Known RBP	12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	DPYSL3	Q14195	570 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	KRT81	Q14533	505 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	LBR	Q14739	615 aa	Known RBP	12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	POM121L1P	Q3SYA9	428 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TMEM52B	Q4KMG9	183 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TXNRD3NB	Q6F5E7	133 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TIGD7	Q6NT04	549 aa	Predicted RBP	12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	KYAT3	Q6YP21	454 aa	Known RBP	12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TTC7B	Q86TV6	843 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	DEFB124	Q8NES8	71 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	KLHDC7B	Q96G42	594 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CELF6	Q96J87	481 aa	Known RBP	12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	BTBD6	Q96KE9	485 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TSGA13	Q96PP4	275 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CINP	Q9BW66	212 aa	Predicted RBP	12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	C1QTNF7	Q9BXJ2	289 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PACSIN1	Q9BY11	444 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ATP13A3	Q9H7F0	1226 aa		12.45	□□□□□ -0.42
CLTCL1-205	ENST00000538828		A0A0A6YYK5	440 aa	Predicted RBP	12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	FAM221B	A6H8Z2	402 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828		A6NNZ2	444 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	DFFA	O00273	331 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SOCS5	O75159	536 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	DKK1	O94907	266 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PEX11B	O96011	259 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TIMP2	P16035	220 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CR2	P20023	1033 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MX2	P20592	715 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	NFKBIA	P25963	317 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SERPINA4	P29622	427 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CYLC1	P35663	651 aa	Predicted RBP	12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ABL2	P42684	1182 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	RABIF	P47224	123 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ZNF75D	P51815	510 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SGCG	Q13326	291 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TRIP6	Q15654	476 aa	Known RBP	12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	UGP2	Q16851	508 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SRL	Q86TD4	932 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TEX26	Q8N6G2	289 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	KCTD6	Q8NC69	237 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TSEN2	Q8NCE0	465 aa	Known RBP	12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	OR2I1P	Q8NGU4	316 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	NSMCE1	Q8WV22	266 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	KLF6	Q99612	283 aa	Predicted RBP	12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MGME1	Q9BQP7	344 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	RBSN	Q9H1K0	784 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	IL21R	Q9HBE5	538 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ETNK2	Q9NVF9	386 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	KLHL11	Q9NVR0	708 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	KCTD5	Q9NXV2	234 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ANGPTL2	Q9UKU9	493 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	WASF3	Q9UPY6	502 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PCDHB9	Q9Y5E1	797 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CHD8	Q9HCK8	2581 aa		12.44	□□□□□ -0.42
CLTCL1-205	ENST00000538828	NEMP1	O14524	444 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TRAFD1	O14545	582 aa	Predicted RBP	12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	WNT9A	O14904	365 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SLC31A1	O15431	190 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SPINT1	O43278	529 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	HTRA2	O43464	458 aa	Predicted RBP	12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	KDELR1	P24390	212 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CCNC	P24863	283 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MAT2A	P31153	395 aa	Known RBP	12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	GARS	P41250	739 aa	Known RBP	12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	YPEL5	P62699	121 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	BCL2L1	Q07817	233 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	GALNT2	Q10471	571 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	IFI16	Q16666	785 aa	Known RBP	12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ANKRD20A8P	Q5CZ79	823 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MARC1	Q5VT66	337 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ALG1L	Q6GMV1	187 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	LEKR1	Q6ZMV7	388 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SPATS2	Q86XZ4	545 aa	Known RBP	12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TMTC1	Q8IUR5	882 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ATPAF2	Q8N5M1	289 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	OR6K2	Q8NGY2	324 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PCDH19	Q8TAB3	1148 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SAP25	Q8TEE9	199 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MAML1	Q92585	1016 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	NUDCD1	Q96RS6	583 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SPTLC3	Q9NUV7	552 aa		12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	DDX56	Q9NY93	547 aa	Known RBP	12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	APOBEC2	Q9Y235	224 aa	Known RBP	12.43	□□□□□ -0.42
CLTCL1-205	ENST00000538828	GOLGA4	Q13439	2230 aa	Known RBP	12.42	□□□□□ -0.42

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