RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 GRTP1Q5TC63 336 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 C10orf107Q8IVU9 208 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 GPATCH11Q8N954 259 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 C10orf82Q8WW14 230 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 HDAC10Q969S8 669 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 PLD4Q96BZ4 506 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 TRMT2BQ96GJ1 504 aaKnown RBP14.26□□□□□ -0.13
ACTN1-205ENST00000538545 TM6SF2Q9BZW4 377 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 CERS4Q9HA82 394 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 MARCH4Q9P2E8 410 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-205ENST00000538545 STARD13Q9Y3M8 1113 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 HCFC2Q9Y5Z7 792 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 TLL1O43897 1013 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 LRG1P02750 347 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 ALDH3A1P30838 453 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 CTNNB1P35222 781 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 ATXN7L2Q5T6C5 722 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-205ENST00000538545 FBXW10Q5XX13 1052 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 KLHDC10Q6PID8 442 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 TIFABQ6ZNK6 161 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 LRRC49Q8IUZ0 686 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 APCDD1Q8J025 514 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 KIF2BQ8N4N8 673 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 KREMEN2Q8NCW0 462 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 AGR3Q8TD06 166 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 E2F7Q96AV8 911 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 TBATAQ96M53 351 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 CFAP97Q9P2B7 532 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 UBA2Q9UBT2 640 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-205ENST00000538545 MAGEB16A2A368 324 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 GOLGA8CPA6NN73 597 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 PLIN3O60664 434 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 BPGMP07738 259 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 CCR10P46092 362 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 USP10Q14694 798 aaKnown RBP14.25□□□□□ -0.13
ACTN1-205ENST00000538545 EML3Q32P44 896 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 RGS9BPQ6ZS82 235 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 RBM23Q86U06 439 aaKnown RBP14.25□□□□□ -0.13
ACTN1-205ENST00000538545 TMC8Q8IU68 726 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 OVCA2Q8WZ82 227 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 ERP27Q96DN0 273 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 IFT43Q96FT9 208 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 DNAJC1Q96KC8 554 aaKnown RBP14.25□□□□□ -0.13
ACTN1-205ENST00000538545 CDK5RAP1Q96SZ6 601 aaKnown RBP14.25□□□□□ -0.13
ACTN1-205ENST00000538545 CINPQ9BW66 212 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-205ENST00000538545 MYLK2Q9H1R3 596 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 DENND4CQ5VZ89 1909 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 A0A1B0GVM2 712 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 TCAF2A6NFQ2 919 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 TK2O00142 265 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 GPR39O43194 453 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 PSMD3O43242 534 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 HSPA1AP0DMV8 641 aaKnown RBP14.25□□□□□ -0.13
ACTN1-205ENST00000538545 HSPA1BP0DMV9 641 aaKnown RBP14.25□□□□□ -0.13
ACTN1-205ENST00000538545 CSKP41240 450 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 PCLAFQ15004 111 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 CYTH1Q15438 398 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 C5orf22Q49AR2 442 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 PDPK2PQ6A1A2 396 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 POTEHQ6S545 545 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 ARID3BQ8IVW6 561 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-205ENST00000538545 DDI1Q8WTU0 396 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 KCTD4Q8WVF5 259 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 POF1BQ8WVV4 589 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 MCMBPQ9BTE3 642 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 SLC46A2Q9BY10 475 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 LRRC3Q9BY71 257 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 KCNK13Q9HB14 408 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 VPS28Q9UK41 221 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 SPO11Q9Y5K1 396 aa14.25□□□□□ -0.13
ACTN1-205ENST00000538545 CLDN11O75508 207 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 PPM1AP35813 382 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 HTRA4P83105 476 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-205ENST00000538545 FPGSQ05932 587 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 CDK18Q07002 472 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 THOC5Q13769 683 aaKnown RBP14.24□□□□□ -0.13
ACTN1-205ENST00000538545 LILRA6Q6PI73 481 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 TTC7BQ86TV6 843 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 SGF29Q96ES7 293 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 TMA16Q96EY4 203 aaKnown RBP14.24□□□□□ -0.13
ACTN1-205ENST00000538545 RPL10LQ96L21 214 aaKnown RBP14.24□□□□□ -0.13
ACTN1-205ENST00000538545 MAGEH1Q9H213 219 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 PRKAG2Q9UGJ0 569 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 CRYL1Q9Y2S2 319 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 DNAH14Q0VDD8 3507 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 INSIG1O15503 277 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 SMAD6O43541 496 aaKnown RBP14.24□□□□□ -0.13
ACTN1-205ENST00000538545 LDB2O43679 373 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 BNIP3LO60238 219 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 C1QTNF8P60827 252 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 SEMG2Q02383 582 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 ITGA9Q13797 1035 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 CBX2Q14781 532 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-205ENST00000538545 HSF5Q4G112 596 aaPredicted RBP14.24□□□□□ -0.13
ACTN1-205ENST00000538545 TSTD2Q5T7W7 516 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 NEPROQ6NW34 567 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 RMDN1Q96DB5 314 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 OMDQ99983 421 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 FBXO5Q9UKT4 447 aa14.24□□□□□ -0.13
ACTN1-205ENST00000538545 INSL6Q9Y581 213 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms