RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 ATXN7L2Q5T6C5 722 aaPredicted RBP8.76□□□□□ -1.01
DDB1-212ENST00000538470 IGF2-ASQ6U949 168 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 KDM7AQ6ZMT4 941 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 MACC1Q6ZN28 852 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 TMC6Q7Z403 805 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 PHLDB2Q86SQ0 1253 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 DNAAF5Q86Y56 855 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 LSMEM2Q8N112 164 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 UMODL1-AS1Q8N2C9 162 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 TPCN2Q8NHX9 752 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 WDR48Q8TAF3 677 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 HCAR2Q8TDS4 363 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 CXorf40AQ8TE69 158 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 FGF11Q92914 225 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 GLMNQ92990 594 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 VOPP1Q96AW1 172 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 VCPIP1Q96JH7 1222 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 KLHL32Q96NJ5 620 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 AGPAT1Q99943 283 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 NCAPGQ9BPX3 1015 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 CPEB1Q9BZB8 566 aaKnown RBP8.76□□□□□ -1.01
DDB1-212ENST00000538470 NOL6Q9H6R4 1146 aaKnown RBP8.76□□□□□ -1.01
DDB1-212ENST00000538470 SPASTQ9UBP0 616 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 APOBEC3BQ9UH17 382 aaKnown RBP8.76□□□□□ -1.01
DDB1-212ENST00000538470 SALL4Q9UJQ4 1053 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 FZD10Q9ULW2 581 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 MYO6Q9UM54 1294 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 ITM2BQ9Y287 266 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 U3KQA8 63 aa8.76□□□□□ -1.01
DDB1-212ENST00000538470 EME2A4GXA9 379 aaPredicted RBP8.75□□□□□ -1.01
DDB1-212ENST00000538470 EIF4E1BA6NMX2 242 aaKnown RBP8.75□□□□□ -1.01
DDB1-212ENST00000538470 RASA4BC9J798 803 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 RASA4O43374 803 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 TCEA3O75764 348 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 MBD3O95983 291 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 JUNDP17535 347 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 GKP32189 559 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 RPIAP49247 311 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 BLKP51451 505 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 NDST2P52849 883 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 PCBP4P57723 403 aaKnown RBP8.75□□□□□ -1.01
DDB1-212ENST00000538470 TPI1P60174 286 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 EIF2B5Q13144 721 aaKnown RBP8.75□□□□□ -1.01
DDB1-212ENST00000538470 SERINC3Q13530 473 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 NR0B2Q15466 257 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 PPP1R15BQ5SWA1 713 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 SCYL2Q6P3W7 929 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 DCUN1D2Q6PH85 259 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 PHACTR4Q8IZ21 702 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 PYROXD2Q8N2H3 581 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 TP53I13Q8NBR0 393 aaPredicted RBP8.75□□□□□ -1.01
DDB1-212ENST00000538470 LSM14AQ8ND56 463 aaKnown RBP8.75□□□□□ -1.01
DDB1-212ENST00000538470 ZNF248Q8NDW4 579 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 IFI44Q8TCB0 444 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 MAPK15Q8TD08 544 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 LMX1AQ8TE12 382 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 NAT6Q93015 286 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 CENPTQ96BT3 561 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 HMCESQ96FZ2 354 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 ZNF578Q96N58 590 aaPredicted RBP8.75□□□□□ -1.01
DDB1-212ENST00000538470 TUBGCP5Q96RT8 1024 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 LRRC61Q9BV99 259 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 PRORYQ9H606 182 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 PDFQ9HBH1 243 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 LHX3Q9UBR4 397 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 UBA2Q9UBT2 640 aaPredicted RBP8.75□□□□□ -1.01
DDB1-212ENST00000538470 GGT7Q9UJ14 662 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 BPTFQ12830 3046 aa8.75□□□□□ -1.01
DDB1-212ENST00000538470 KIF26BQ2KJY2 2108 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 TMEM110-MUSTN1A8MSY1 372 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 LMO7DNF2Z398 122 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 TK2O00142 265 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 CREB3O43889 395 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 CSO75390 466 aaKnown RBP8.74□□□□□ -1.01
DDB1-212ENST00000538470 NEBLO76041 1014 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 CDK11BP21127 795 aaKnown RBP8.74□□□□□ -1.01
DDB1-212ENST00000538470 XPAP23025 273 aaPredicted RBP8.74□□□□□ -1.01
DDB1-212ENST00000538470 MLLT3P42568 568 aaPredicted RBP8.74□□□□□ -1.01
DDB1-212ENST00000538470 LSSP48449 732 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 CSNK1DP48730 415 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 PEX5P50542 639 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 ZNF135P52742 658 aaPredicted RBP8.74□□□□□ -1.01
DDB1-212ENST00000538470 UCNP55089 124 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 ERVPABLB-1P60509 514 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 RPL7AP62424 266 aaKnown RBP8.74□□□□□ -1.01
DDB1-212ENST00000538470 GABREP78334 506 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 NCAPHQ15003 741 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 AGERQ15109 404 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 IRF4Q15306 451 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 TMEM52BQ4KMG9 183 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 ZNF542PQ5EBM4 170 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 TPRG1LQ5T0D9 272 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 C6orf132Q5T0Z8 1188 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 CCDC183Q5T5S1 534 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 CFAP58Q5T655 872 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 ACAD10Q6JQN1 1059 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 ERAP2Q6P179 960 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 BRAT1Q6PJG6 821 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 LEKR1Q6ZMV7 388 aa8.74□□□□□ -1.01
DDB1-212ENST00000538470 APTXQ7Z2E3 356 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms