RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-209ENST00000538225 CDKN2BP42772 138 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 MAXP61244 160 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 RACK1P63244 317 aaKnown RBP23.31■■□□□ 1.32
CLTA-209ENST00000538225 UAP1L1Q3KQV9 507 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 CFAP58Q5T655 872 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 SEL1L3Q68CR1 1132 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 TIGD7Q6NT04 549 aaPredicted RBP23.31■■□□□ 1.32
CLTA-209ENST00000538225 NPNTQ6UXI9 565 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 SPOCD1Q6ZMY3 1216 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 ADAT2Q7Z6V5 191 aaKnown RBP23.31■■□□□ 1.32
CLTA-209ENST00000538225 HORMAD1Q86X24 394 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 CCDC50Q8IVM0 306 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 KATNAL2Q8IYT4 538 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 RCOR2Q8IZ40 523 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 RAB7BQ96AH8 199 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 ZNF641Q96N77 438 aaPredicted RBP23.31■■□□□ 1.32
CLTA-209ENST00000538225 ZNF830Q96NB3 372 aaPredicted RBP23.31■■□□□ 1.32
CLTA-209ENST00000538225 TSGA13Q96PP4 275 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 ATP13A3Q9H7F0 1226 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 DKK3Q9UBP4 350 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 GGT7Q9UJ14 662 aa23.31■■□□□ 1.32
CLTA-209ENST00000538225 ZFR2Q9UPR6 939 aaKnown RBP23.31■■□□□ 1.32
CLTA-209ENST00000538225 ADAMTS9Q9P2N4 1935 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 SLC30A4O14863 429 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 MATN3O15232 486 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 SLC31A1O15431 190 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 AP1G1O43747 822 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 PRLRP16471 622 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 ZFXP17010 805 aaPredicted RBP23.3■■□□□ 1.32
CLTA-209ENST00000538225 ITIH2P19823 946 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 XPAP23025 273 aaPredicted RBP23.3■■□□□ 1.32
CLTA-209ENST00000538225 SERPINA4P29622 427 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 HSPA9P38646 679 aaKnown RBP23.3■■□□□ 1.32
CLTA-209ENST00000538225 BNC1Q01954 994 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 BCL2L1Q07817 233 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 ZNF284Q2VY69 593 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 SETMARQ53H47 684 aaPredicted RBP23.3■■□□□ 1.32
CLTA-209ENST00000538225 KAZNQ674X7 775 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 LRRC8AQ8IWT6 810 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 PAF1Q8N7H5 531 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 CCDC112Q8NEF3 446 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 FEM1CQ96JP0 617 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 NSMCE3Q96MG7 304 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 NT5MQ9NPB1 228 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 SCUBE2Q9NQ36 999 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 DLL3Q9NYJ7 618 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 ADGRG1Q9Y653 693 aa23.3■■□□□ 1.32
CLTA-209ENST00000538225 ARHGAP6O43182 974 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 TSPAN6O43657 245 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 GRIA4P48058 902 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 AP1S1P61966 158 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 ITKQ08881 620 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 HNRNPDQ14103 355 aaKnown RBP23.29■■□□□ 1.32
CLTA-209ENST00000538225 TAZQ16635 292 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 KIF19Q2TAC6 998 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 NAPEPLDQ6IQ20 393 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 MINDY1Q8N5J2 469 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 TEX26Q8N6G2 289 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 LRRC57Q8N9N7 239 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 HCAR2Q8TDS4 363 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 HDAC11Q96DB2 347 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 NUDCD1Q96RS6 583 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 LGMNQ99538 433 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 MYOCQ99972 504 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 MGME1Q9BQP7 344 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 NOD2Q9HC29 1040 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 DMTF1Q9Y222 760 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 ANKRD6Q9Y2G4 727 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 PCDHA3Q9Y5H8 950 aa23.29■■□□□ 1.32
CLTA-209ENST00000538225 PLXNA2O75051 1894 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 SPINT1O43278 529 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 CST8O60676 142 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 WNT1P04628 370 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 CCNB1P14635 433 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 CD38P28907 300 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 CTNNA1P35221 906 aaKnown RBP23.28■■□□□ 1.32
CLTA-209ENST00000538225 NUDT1P36639 197 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 RPS21P63220 83 aaKnown RBP23.28■■□□□ 1.32
CLTA-209ENST00000538225 TFDP2Q14188 446 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 PUM1Q14671 1186 aaKnown RBP eCLIP23.28■■□□□ 1.325e-8■■□□□ 12.9
CLTA-209ENST00000538225 TFDP3Q5H9I0 405 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 KIAA1161Q6NSJ0 714 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 CCDC13Q8IYE1 715 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.28■■□□□ 1.32
CLTA-209ENST00000538225 EXD1Q8NHP7 514 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 MAML1Q92585 1016 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 RTKNQ9BST9 563 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 ZDHHC5Q9C0B5 715 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 FZD3Q9NPG1 666 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 RBM22Q9NW64 420 aaKnown RBP eCLIP23.28■■□□□ 1.32
CLTA-209ENST00000538225 CA5BQ9Y2D0 317 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 SNX11Q9Y5W9 270 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 SHROOM3Q8TF72 1996 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 PCDH15Q96QU1 1955 aa23.28■■□□□ 1.32
CLTA-209ENST00000538225 DMXL1Q9Y485 3027 aa23.27■■□□□ 1.32
CLTA-209ENST00000538225 TSPAN11A1L157 253 aa23.27■■□□□ 1.32
CLTA-209ENST00000538225 DCDC2BA2VCK2 349 aa23.27■■□□□ 1.32
CLTA-209ENST00000538225 IGLON5A6NGN9 336 aa23.27■■□□□ 1.32
CLTA-209ENST00000538225 PRAMEF26H0Y7S4 382 aa23.27■■□□□ 1.32
CLTA-209ENST00000538225 AREL1O15033 823 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms