RNA–Protein interactions for RNA: ENST00000537888.1

PEX11B-203, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2 BASIC

Gene PEX11B, Length 1,632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-203ENST00000537888 KCTD11Q693B1 232 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 PKN3Q6P5Z2 889 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 TSSK4Q6SA08 328 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 ASCL5Q7RTU5 278 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 PID1Q7Z2X4 250 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 LRRC49Q8IUZ0 686 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 C4orf33Q8N1A6 199 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 SPEM1Q8N4L4 309 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 PDCD7Q8N8D1 485 aaKnown RBP13.06□□□□□ -0.32
PEX11B-203ENST00000537888 ANKS4BQ8N8V4 417 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 ZBTB44Q8NCP5 570 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 TTC17Q96AE7 1141 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 GRAMD1AQ96CP6 724 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 MTBPQ96DY7 904 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 CABS1Q96KC9 395 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 KLF16Q9BXK1 252 aaPredicted RBP13.06□□□□□ -0.32
PEX11B-203ENST00000537888 MKS1Q9NXB0 559 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 KLHL8Q9P2G9 620 aaPredicted RBP13.06□□□□□ -0.32
PEX11B-203ENST00000537888 R4GN57 208 aa13.06□□□□□ -0.32
PEX11B-203ENST00000537888 PTPRZ1P23471 2315 aaPredicted RBP13.05□□□□□ -0.32
PEX11B-203ENST00000537888 GOLGA6L7A0A1B0GV03 622 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 SLC9A3R1O14745 358 aaPredicted RBP13.05□□□□□ -0.32
PEX11B-203ENST00000537888 PSMD3O43242 534 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 SNX3O60493 162 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 SPAG7O75391 227 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 KRT37O76014 449 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 KIAA0754O94854 1291 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 EGFP01133 1207 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 SNRPAP09012 282 aaKnown RBP13.05□□□□□ -0.32
PEX11B-203ENST00000537888 PGAM1P18669 254 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 CA4P22748 312 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 CCNCP24863 283 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 CNTFP26441 200 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 RPA3P35244 121 aaPredicted RBP13.05□□□□□ -0.32
PEX11B-203ENST00000537888 GRIA1P42261 906 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 SERPINB9P50453 376 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 GALK1P51570 392 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 CCR3P51677 355 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 SATB1Q01826 763 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 DHCR24Q15392 516 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 PDK4Q16654 411 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 ACBD5Q5T8D3 534 aaPredicted RBP13.05□□□□□ -0.32
PEX11B-203ENST00000537888 ARHGAP12Q8IWW6 846 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 BBS7Q8IWZ6 715 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 MPP5Q8N3R9 675 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 FCRL2Q96LA5 508 aaPredicted RBP13.05□□□□□ -0.32
PEX11B-203ENST00000537888 TEKT5Q96M29 485 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 P2RY13Q9BPV8 354 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 GORASP1Q9BQQ3 440 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 SEPT10Q9P0V9 454 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 NUDT5Q9UKK9 219 aa13.05□□□□□ -0.32
PEX11B-203ENST00000537888 CXorf49A8MYA2 514 aaPredicted RBP13.04□□□□□ -0.32
PEX11B-203ENST00000537888 K7ESF4 209 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 KCNK1O00180 336 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 AP3B1O00203 1094 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
PEX11B-203ENST00000537888 DRD1P21728 446 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 FOXN2P32314 431 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 CD68P34810 354 aaPredicted RBP13.04□□□□□ -0.32
PEX11B-203ENST00000537888 ATP5C1P36542 298 aaKnown RBP13.04□□□□□ -0.32
PEX11B-203ENST00000537888 CCNFP41002 786 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 NEK3P51956 506 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 CSTF1Q05048 431 aaKnown RBP13.04□□□□□ -0.32
PEX11B-203ENST00000537888 GRSF1Q12849 480 aaKnown RBP eCLIP13.04□□□□□ -0.32
PEX11B-203ENST00000537888 DNAJC3Q13217 504 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 SLC1A5Q15758 541 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 FAM182AQ5T1J6 154 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 TIFABQ6ZNK6 161 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 HTR3DQ70Z44 454 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 MARK2Q7KZI7 788 aaKnown RBP13.04□□□□□ -0.32
PEX11B-203ENST00000537888 TAX1BP1Q86VP1 789 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 PPM1NQ8N819 430 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 NETO2Q8NC67 525 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 GDAP1Q8TB36 358 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 FATE1Q969F0 183 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 OTUB2Q96DC9 234 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 MRRFQ96E11 262 aaKnown RBP13.04□□□□□ -0.32
PEX11B-203ENST00000537888 PLCD4Q9BRC7 762 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 CASS4Q9NQ75 786 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 SMYD2Q9NRG4 433 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 OLA1Q9NTK5 396 aaKnown RBP13.04□□□□□ -0.32
PEX11B-203ENST00000537888 TBC1D14Q9P2M4 693 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 SFMBT1Q9UHJ3 866 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 MAD1L1Q9Y6D9 718 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 DMXL1Q9Y485 3027 aa13.04□□□□□ -0.32
PEX11B-203ENST00000537888 MYO1CO00159 1063 aa13.03□□□□□ -0.32
PEX11B-203ENST00000537888 ZBTB24O43167 697 aaPredicted RBP13.03□□□□□ -0.32
PEX11B-203ENST00000537888 GFRA3O60609 400 aa13.03□□□□□ -0.32
PEX11B-203ENST00000537888 LILRB5O75023 590 aa13.03□□□□□ -0.32
PEX11B-203ENST00000537888 KRT38O76015 456 aa13.03□□□□□ -0.32
PEX11B-203ENST00000537888 CXCL12P48061 93 aa13.03□□□□□ -0.32
PEX11B-203ENST00000537888 NIPAL4Q0D2K0 466 aa13.03□□□□□ -0.32
PEX11B-203ENST00000537888 MESP2Q0VG99 397 aa13.03□□□□□ -0.32
PEX11B-203ENST00000537888 IFT88Q13099 833 aa13.03□□□□□ -0.32
PEX11B-203ENST00000537888 ZBTB17Q13105 803 aa13.03□□□□□ -0.32
PEX11B-203ENST00000537888 MTA1Q13330 715 aa13.03□□□□□ -0.32
PEX11B-203ENST00000537888 LACTB2Q53H82 288 aaPredicted RBP13.03□□□□□ -0.32
PEX11B-203ENST00000537888 Q6ZNB5 142 aa13.03□□□□□ -0.32
PEX11B-203ENST00000537888 C12orf40Q86WS4 652 aa13.03□□□□□ -0.32
PEX11B-203ENST00000537888 ZNF683Q8IZ20 524 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms