RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 HNRNPA1L2Q32P51 320 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 POM121L1PQ3SYA9 428 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 PREPLQ4J6C6 727 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 C9orf64Q5T6V5 341 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 RANBP10Q6VN20 620 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 PPP1R21Q6ZMI0 780 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 ZSWIM9Q86XI8 627 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 IGDCC3Q8IVU1 814 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 CHPFQ8IZ52 775 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 STK40Q8N2I9 435 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 PDCD6IPQ8WUM4 868 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 UCMAQ8WVF2 138 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 CASS4Q9NQ75 786 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 VPS45Q9NRW7 570 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 HAUS2Q9NVX0 235 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 MUTYHQ9UIF7 546 aa15.81■□□□□ 0.12
SFSWAP-206ENST00000537582 LOC285095A0A1B0GVY8 99 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 PIRTP0C851 137 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 H2AFXP16104 143 aaPredicted RBP15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 MGAT1P26572 445 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 MAGEA3P43357 314 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 CSNK1DP48730 415 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 METAP1P53582 386 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 CDK18Q07002 472 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 GRSF1Q12849 480 aaKnown RBP eCLIP15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 BBS9Q3SYG4 887 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 SIRPB2Q5JXA9 342 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 CERCAMQ5T4B2 595 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 LRRC8BQ6P9F7 803 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 ANKMY2Q8IV38 441 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 SUGP1Q8IWZ8 645 aaKnown RBP15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 EIF1ADQ8N9N8 165 aaKnown RBP15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 SAYSD1Q9NPB0 183 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 ARHGEF3Q9NR81 526 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 MTRF1LQ9UGC7 380 aaKnown RBP15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 MTF2Q9Y483 593 aaPredicted RBP15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 WASF2Q9Y6W5 498 aa15.8■□□□□ 0.12
SFSWAP-206ENST00000537582 A0A0U1RQS6 177 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 GOLGA6CA6NDK9 693 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 GOLGA6BA6NDN3 693 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 ERI2A8K979 691 aaKnown RBP15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 TRAFD1O14545 582 aaPredicted RBP15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 RNF40O75150 1001 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 UGT2B4P06133 528 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 EPHX1P07099 455 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 GOLGA6DP0CG33 693 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 HNRNPLP14866 589 aaKnown RBP eCLIP15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 GLULP15104 373 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 MCM3P25205 808 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 ARL4CP56559 192 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 CDK16Q00536 496 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 PDIA2Q13087 525 aaKnown RBP15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 BRD3Q15059 726 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 SLC1A5Q15758 541 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 ARSIQ5FYB1 569 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 NAPEPLDQ6IQ20 393 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 PKN3Q6P5Z2 889 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 TMC3Q7Z5M5 1100 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 DNAAF3Q8N9W5 541 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 IL17RCQ8NAC3 791 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 KDM1BQ8NB78 822 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 LPCAT1Q8NF37 534 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 IFT43Q96FT9 208 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 FEM1CQ96JP0 617 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 TXLNGYQ9BZA5 131 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 SYBUQ9NX95 663 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 GOLGA6AQ9NYA3 693 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 SARDHQ9UL12 918 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 PCDHB9Q9Y5E1 797 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 EDDM13A0A1B0GTR0 161 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 CCDC151A5D8V7 595 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 PSMD3O43242 534 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 FZD6O60353 706 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 ADAM23O75077 832 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 LEFTY1O75610 366 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 KLF8O95600 359 aaPredicted RBP15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 DRD1P21728 446 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 SLC8A1P32418 973 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 RECQLP46063 649 aaPredicted RBP15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 BCL2L1Q07817 233 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 ENPP2Q13822 863 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 CCINQ13939 588 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 LRRC73Q5JTD7 316 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 KIAA1211LQ6NV74 962 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 Q6ZS52 159 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 NUDT18Q6ZVK8 323 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 MICALCLQ6ZW33 695 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 SIX5Q8N196 739 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 ZNF687Q8N1G0 1237 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 C9orf72Q96LT7 481 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 PPP1R2P1Q96PQ5 205 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 FAM129BQ96TA1 746 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 HEPHQ9BQS7 1158 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 FAM129AQ9BZQ8 928 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 ATP13A3Q9H7F0 1226 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 PRSS16Q9NQE7 514 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 FBXL21Q9UKT6 434 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 SLC8A2Q9UPR5 921 aa15.79■□□□□ 0.12
SFSWAP-206ENST00000537582 CCDC78A2IDD5 438 aa15.78■□□□□ 0.12
SFSWAP-206ENST00000537582 E7ESA3 106 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms