RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TCEAL1Q15170 157 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 TMCO4Q5TGY1 634 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 RAD9BQ6WBX8 426 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 GCNT7Q6ZNI0 430 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 SRLQ86TD4 932 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 TTC7BQ86TV6 843 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 NAXDQ8IW45 347 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 CCDC170Q8IYT3 715 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 ATPAF2Q8N5M1 289 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 PSKH2Q96QS6 385 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 CPEB1Q9BZB8 566 aaKnown RBP13.31□□□□□ -0.28
PRKDC-206ENST00000536429 SUV39H2Q9H5I1 410 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 DKK3Q9UBP4 350 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 SALL4Q9UJQ4 1053 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 TPX2Q9ULW0 747 aaKnown RBP13.31□□□□□ -0.28
PRKDC-206ENST00000536429 BTBD3Q9Y2F9 522 aa13.31□□□□□ -0.28
PRKDC-206ENST00000536429 REXO2Q9Y3B8 237 aaKnown RBP13.31□□□□□ -0.28
PRKDC-206ENST00000536429 ASPMQ8IZT6 3477 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 TSPAN11A1L157 253 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 PAK4O96013 591 aaPredicted RBP13.3□□□□□ -0.28
PRKDC-206ENST00000536429 ADRB1P08588 477 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 COMTP21964 271 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 SERPINB6P35237 376 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 MAXP61244 160 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 RPS21P63220 83 aaKnown RBP13.3□□□□□ -0.28
PRKDC-206ENST00000536429 SLC14A1Q13336 389 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 RFTN1Q14699 578 aaPredicted RBP13.3□□□□□ -0.28
PRKDC-206ENST00000536429 STAT4Q14765 748 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 ZFYVE27Q5T4F4 411 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 KIAA1161Q6NSJ0 714 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 MFSD2AQ8NA29 543 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 SPC24Q8NBT2 197 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 OR13H1Q8NG92 308 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 RAB7BQ96AH8 199 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 FEM1CQ96JP0 617 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 ZNF599Q96NL3 588 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 ELF4Q99607 663 aaPredicted RBP13.3□□□□□ -0.28
PRKDC-206ENST00000536429 WRAP53Q9BUR4 548 aaKnown RBP13.3□□□□□ -0.28
PRKDC-206ENST00000536429 SLC17A9Q9BYT1 436 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 SEPT3Q9UH03 358 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 LCMT1Q9UIC8 334 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 EPN1Q9Y6I3 576 aaPredicted RBP13.3□□□□□ -0.28
PRKDC-206ENST00000536429 DOCK9Q9BZ29 2069 aa13.3□□□□□ -0.28
PRKDC-206ENST00000536429 A0A1B0GTQ1 180 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 LRRD1A4D1F6 860 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 POM121BA6NF01 834 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 NEMP1O14524 444 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 TRAFD1O14545 582 aaPredicted RBP13.29□□□□□ -0.28
PRKDC-206ENST00000536429 TSPAN6O43657 245 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 MMP20O60882 483 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 CBFA2T3O75081 653 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 NDUFA10O95299 355 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 TOP3BO95985 862 aaKnown RBP13.29□□□□□ -0.28
PRKDC-206ENST00000536429 KRT1P04264 644 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 ZNF883P0CG24 379 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 CEACAM1P13688 526 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 CR2P20023 1033 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 HNRNPA2B1P22626 353 aaKnown RBP13.29□□□□□ -0.28
PRKDC-206ENST00000536429 AKT2P31751 481 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 CYLC1P35663 651 aaPredicted RBP13.29□□□□□ -0.28
PRKDC-206ENST00000536429 NUDT1P36639 197 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 GARSP41250 739 aaKnown RBP13.29□□□□□ -0.28
PRKDC-206ENST00000536429 NOP2P46087 812 aaKnown RBP13.29□□□□□ -0.28
PRKDC-206ENST00000536429 CSNK1DP48730 415 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 SCNN1BP51168 640 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 FOXK2Q01167 660 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 NSUN2Q08J23 767 aaKnown RBP eCLIP13.29□□□□□ -0.28
PRKDC-206ENST00000536429 GALNT2Q10471 571 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 ZNF235Q14590 738 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 DBX2Q6ZNG2 339 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 GATAD2AQ86YP4 633 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 TMEM139Q8IV31 216 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 SLC22A18ASQ8N1D0 253 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 PLD5Q8N7P1 536 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 ACRBPQ8NEB7 543 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 RNF25Q96BH1 459 aaPredicted RBP13.29□□□□□ -0.28
PRKDC-206ENST00000536429 BMFQ96LC9 184 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 RNF157Q96PX1 679 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 KLF6Q99612 283 aaPredicted RBP13.29□□□□□ -0.28
PRKDC-206ENST00000536429 C1QTNF2Q9BXJ5 285 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 PCDH12Q9NPG4 1184 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 GDF3Q9NR23 364 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 PCOLCE2Q9UKZ9 415 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 DUSP10Q9Y6W6 482 aa13.29□□□□□ -0.28
PRKDC-206ENST00000536429 PCNX2A6NKB5 2137 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 A0A0U1RQJ8 604 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 THEGLP0DJG4 465 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 SLC1A1P43005 524 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 MARCKSL1P49006 195 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 CCT8P50990 548 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 HADHBP55084 474 aaKnown RBP13.28□□□□□ -0.28
PRKDC-206ENST00000536429 SIM1P81133 766 aaPredicted RBP13.28□□□□□ -0.28
PRKDC-206ENST00000536429 IHHQ14623 411 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 LLGL1Q15334 1064 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 SPA17Q15506 151 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 UGP2Q16851 508 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 TPRG1LQ5T0D9 272 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 LRRC38Q5VT99 294 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 MFSD7Q6UXD7 560 aa13.28□□□□□ -0.28
PRKDC-206ENST00000536429 NPNTQ6UXI9 565 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms