RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 KIAA1468Q9P260 1216 aa13.15□□□□□ -0.3
TNFRSF1A-207ENST00000535958 OR12D3Q9UGF7 316 aa13.15□□□□□ -0.3
TNFRSF1A-207ENST00000535958 ACTL7AQ9Y615 435 aa13.15□□□□□ -0.3
TNFRSF1A-207ENST00000535958 COL6A6A6NMZ7 2263 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CDRT15L2A8MXV6 281 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PLD2O14939 933 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 BUB1O43683 1085 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 MMP20O60882 483 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 JMJD7P0C870 316 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TSHRP16473 764 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 EIF4A3P38919 411 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 RHOAP61586 193 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 ELP6Q0PNE2 266 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CAMK4Q16566 473 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 MYLK3Q32MK0 819 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 VWA3BQ502W6 1294 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 NAA35Q5VZE5 725 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 LEKR1Q6ZMV7 388 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CLEC14AQ86T13 490 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 GKN2Q86XP6 184 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 HID1Q8IV36 788 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 FBXO39Q8N4B4 442 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 EMC1Q8N766 993 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PAF1Q8N7H5 531 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 LIN37Q96GY3 246 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CCNL2Q96S94 520 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 WRAP53Q9BUR4 548 aaKnown RBP13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 SEMA4CQ9C0C4 833 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TCEAL2Q9H3H9 227 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TMEM248Q9NWD8 314 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 ZNF212Q9UDV6 495 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 MGAQ8IWI9 3026 aa13.14□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TMEM110-MUSTN1A8MSY1 372 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 YY2O15391 372 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 GADD45BO75293 160 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 GCATO75600 419 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TMCC1O94876 653 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 RASGRP1O95267 797 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 GJB6O95452 261 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 INHBCP55103 352 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 KCNC4Q03721 635 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CLN3Q13286 438 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TCEA2Q15560 299 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 ATXN7L2Q5T6C5 722 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 RAB11FIP2Q7L804 512 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 ARCQ7LC44 396 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 RD3Q7Z3Z2 195 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 MLKLQ8NB16 471 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 OR6C4Q8NGE1 309 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PCDH19Q8TAB3 1148 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CASKIN2Q8WXE0 1202 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CPA5Q8WXQ8 436 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CCDC74AQ96AQ1 378 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CENPTQ96BT3 561 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TMEM74Q96NL1 305 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TUBGCP2Q9BSJ2 902 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CPEB1Q9BZB8 566 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 DACH1Q9UI36 760 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TMEM59LQ9UK28 342 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 FHOD1Q9Y613 1164 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CFAP46Q8IYW2 2715 aa13.13□□□□□ -0.31
TNFRSF1A-207ENST00000535958 A0A1W2PNU3 283 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 AREL1O15033 823 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 RPLP0P05388 317 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 MMEP08473 750 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 DESP17661 470 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 ADRA1BP35368 520 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 HK3P52790 923 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 NOMO3P69849 1222 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 SKOR1P84550 965 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 NRG1Q02297 640 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 LRRC14Q15048 493 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 IRF4Q15306 451 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 C15orf59Q2T9L4 293 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 ERAP2Q6P179 960 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 ENPP7Q6UWV6 458 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 USP53Q70EK8 1073 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 NOP9Q86U38 636 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 ZNF677Q86XU0 584 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 SDR16C5Q8N3Y7 309 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 KYQ8NBH2 561 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 RXFP2Q8WXD0 754 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PRR11Q96HE9 360 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 EDEM3Q9BZQ6 932 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 TTYH3Q9C0H2 523 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 NDFIP2Q9NV92 336 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 SEPT10Q9P0V9 454 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 KLQ9UEF7 1012 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 ATXN7L1Q9ULK2 861 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 GPR34Q9UPC5 381 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 ATMQ13315 3056 aa13.12□□□□□ -0.31
TNFRSF1A-207ENST00000535958 COL27A1Q8IZC6 1860 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 PMS2P1A4D2B8 440 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 ANKRD62A6NC57 917 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 D6RAR5 112 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 F8VZ95 297 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 KDELR3O43731 214 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 LRIG2O94898 1065 aa13.11□□□□□ -0.31
TNFRSF1A-207ENST00000535958 CD160O95971 181 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms