RNA–Protein interactions for RNA: ENST00000535709.5

GYPA-211, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-211ENST00000535709 SLC39A6Q13433 755 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 RAB32Q13637 225 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 DDX39BQ13838 428 aaKnown RBP4.6□□□□□ -1.67
GYPA-211ENST00000535709 PFKFB3Q16875 520 aaPredicted RBP4.6□□□□□ -1.67
GYPA-211ENST00000535709 LRIT3Q3SXY7 679 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 FUT11Q495W5 492 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 PLEKHO1Q53GL0 409 aaPredicted RBP4.6□□□□□ -1.67
GYPA-211ENST00000535709 ZNF385BQ569K4 471 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 CCDC178Q5BJE1 867 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 KHDC1LQ5JSQ8 128 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 TMTC4Q5T4D3 741 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 LIPMQ5VYY2 423 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 RRAGBQ5VZM2 374 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 RCSD1Q6JBY9 416 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 C8orf74Q6P047 294 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 C6orf89Q6UWU4 347 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 RRAGAQ7L523 313 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 SLCO6A1Q86UG4 719 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 FAM83AQ86UY5 434 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 TMEM52Q8NDY8 209 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 FBXO18Q8NFZ0 1043 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 OR14C36Q8NHC7 312 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 SLC26A7Q8TE54 656 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 METTL21AQ8WXB1 218 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 CPT1BQ92523 772 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 MRPS27Q92552 414 aaKnown RBP4.6□□□□□ -1.67
GYPA-211ENST00000535709 C3orf49Q96BT1 292 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 C7orf34Q96L11 122 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 WRNIP1Q96S55 665 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 MMP19Q99542 508 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 HNRNPABQ99729 332 aaKnown RBP4.6□□□□□ -1.67
GYPA-211ENST00000535709 FDXACB1Q9BRP7 624 aaPredicted RBP4.6□□□□□ -1.67
GYPA-211ENST00000535709 TRIM2Q9C040 744 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 TFB2MQ9H5Q4 396 aaKnown RBP4.6□□□□□ -1.67
GYPA-211ENST00000535709 GREM2Q9H772 168 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 KAT14Q9H8E8 782 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 HEYLQ9NQ87 328 aaPredicted RBP4.6□□□□□ -1.67
GYPA-211ENST00000535709 CENPMQ9NSP4 180 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 SOHLH2Q9NX45 425 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 TBC1D7Q9P0N9 293 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 SLC25A10Q9UBX3 287 aaPredicted RBP4.6□□□□□ -1.67
GYPA-211ENST00000535709 IPO11Q9UI26 975 aaKnown RBP4.6□□□□□ -1.67
GYPA-211ENST00000535709 MAD2L2Q9UI95 211 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 SARDHQ9UL12 918 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 PCDHA3Q9Y5H8 950 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 MAPK8IP3Q9UPT6 1336 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 KCPQ6ZWJ8 1503 aa4.6□□□□□ -1.67
GYPA-211ENST00000535709 MYH14Q7Z406 1995 aaKnown RBP4.6□□□□□ -1.67
GYPA-211ENST00000535709 TRBV23OR9-2A0A075B6M9 112 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 TCRBV21S2A2A0A5A6 115 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 FRMD3A2A2Y4 597 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 PMS2P1A4D2B8 440 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 GAGE10A6NGK3 116 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 ENO4A6NNW6 628 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 EFCAB8A8MWE9 144 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 CDRT15L2A8MXV6 281 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 STX16-NPEPL1H3BU86 382 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 SLC33A1O00400 549 aaPredicted RBP4.59□□□□□ -1.67
GYPA-211ENST00000535709 MAN2B1O00754 1011 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 STX16O14662 325 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 PCDH17O14917 1159 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 FGF10O15520 208 aaPredicted RBP4.59□□□□□ -1.67
GYPA-211ENST00000535709 DNPH1O43598 174 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 DIAPH2O60879 1101 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 ZC3H11AO75152 810 aaKnown RBP eCLIP4.59□□□□□ -1.67
GYPA-211ENST00000535709 LARGE1O95461 756 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 PRAMEF12O95522 483 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 DDAH2O95865 285 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 CHRNA1P02708 482 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 CSF2P04141 144 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 EIF2S1P05198 315 aaKnown RBP4.59□□□□□ -1.67
GYPA-211ENST00000535709 PFKMP08237 780 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 PLS3P13797 630 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 SELLP14151 372 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 PFKLP17858 780 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 ERCC2P18074 760 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 IL1R2P27930 398 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 GPD2P43304 727 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 CCR10P46092 362 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 MRPL12P52815 198 aaKnown RBP4.59□□□□□ -1.67
GYPA-211ENST00000535709 SNU13P55769 128 aaKnown RBP4.59□□□□□ -1.67
GYPA-211ENST00000535709 NPEPPSP55786 919 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 CARD18P57730 90 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 NKX3-2P78367 333 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 TJP1Q07157 1748 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 SLC13A2Q13183 592 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 TUSC3Q13454 348 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 ALCAMQ13740 583 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 HNRNPDQ14103 355 aaKnown RBP4.59□□□□□ -1.67
GYPA-211ENST00000535709 RAB39AQ14964 217 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 NFIL3Q16649 462 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 MAN2A1Q16706 1144 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 ERCC6LQ2NKX8 1250 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 CCDC57Q2TAC2 916 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 HABP4Q5JVS0 413 aaKnown RBP4.59□□□□□ -1.67
GYPA-211ENST00000535709 ATAD3BQ5T9A4 648 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 ARHGAP17Q68EM7 881 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 HMBOX1Q6NT76 420 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 NEK5Q6P3R8 708 aa4.59□□□□□ -1.67
GYPA-211ENST00000535709 KLHL35Q6PF15 583 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms