RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ZNF84P51523 738 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 NAP1L1P55209 391 aaKnown RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 SLC37A1P57057 533 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 DMWDQ09019 674 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 NEXNQ0ZGT2 675 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 MTA1Q13330 715 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 VGLL4Q14135 290 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 TTC39AQ5SRH9 613 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 VWA5B1Q5TIE3 1220 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 JAKMIP3Q5VZ66 844 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 KYAT3Q6YP21 454 aaKnown RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 C15orf52Q6ZUT6 534 aaKnown RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 BBS12Q6ZW61 710 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 GALNT7Q86SF2 657 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 PRIMA1Q86XR5 153 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 HERC6Q8IVU3 1022 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 GALNT16Q8N428 558 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 ZNF366Q8N895 744 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 PRSS3P2Q8NHM4 247 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 TDRD7Q8NHU6 1098 aaKnown RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 TBC1D22AQ8WUA7 517 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 ZFPM2Q8WW38 1151 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 TRMT61AQ96FX7 289 aaKnown RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 MAELQ96JY0 434 aaKnown RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 PRMT6Q96LA8 375 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 PPM1MQ96MI6 270 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 GUCD1Q96NT3 240 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 SEC62Q99442 399 aaKnown RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 SH2D3AQ9BRG2 576 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 THUMPD2Q9BTF0 503 aaKnown RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 NPLQ9BXD5 320 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.55□□□□□ -1.841e-6■■□□□ 14.4
SNHG1-202ENST00000535689 IKZF4Q9H2S9 585 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 TASP1Q9H6P5 420 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 CD209Q9NNX6 404 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 IL17RBQ9NRM6 502 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 CWC25Q9NXE8 425 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-202ENST00000535689 PTGFRNQ9P2B2 879 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 OSGIN2Q9Y236 505 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 B3GNT3Q9Y2A9 372 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 DUOX1Q9NRD9 1551 aa3.55□□□□□ -1.84
SNHG1-202ENST00000535689 RRN3P2A6NIE6 340 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 AKAP8O43823 692 aaKnown RBP3.54□□□□□ -1.84
SNHG1-202ENST00000535689 FRAT2O75474 233 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-202ENST00000535689 PLAUP00749 431 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 ELF1P32519 619 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 STAT6P42226 847 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 PAFAH1B1P43034 410 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 ID2Q02363 134 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 PRKCZQ05513 592 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 CDK18Q07002 472 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 DDX10Q13206 875 aaKnown RBP3.54□□□□□ -1.84
SNHG1-202ENST00000535689 CAMK1Q14012 370 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 GALNT3Q14435 633 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 KPNB1Q14974 876 aaKnown RBP3.54□□□□□ -1.84
SNHG1-202ENST00000535689 TRIP6Q15654 476 aaKnown RBP3.54□□□□□ -1.84
SNHG1-202ENST00000535689 GPR68Q15743 365 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 GXYLT1Q4G148 440 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 ALG10Q5BKT4 473 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 ALG10BQ5I7T1 473 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 WDR45BQ5MNZ6 344 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 ATG16L1Q676U5 607 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 LIN54Q6MZP7 749 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 C16orf89Q6UX73 402 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 RBM44Q6ZP01 1051 aaKnown RBP3.54□□□□□ -1.84
SNHG1-202ENST00000535689 FAM57BQ71RH2 274 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 RRM2BQ7LG56 351 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 TMEM200AQ86VY9 491 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 CHSY1Q86X52 802 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 ADGRF4Q8IZF3 695 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 PAQR4Q8N4S7 273 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-202ENST00000535689 DPP10Q8N608 796 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 C8orf58Q8NAV2 365 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 OR52N4Q8NGI2 321 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 MPLKIPQ8TAP9 179 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 ZNF398Q8TD17 642 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 PIGOQ8TEQ8 1089 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 KAZALD1Q96I82 304 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 GPR78Q96P69 363 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 FCRL5Q96RD9 977 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 REEP2Q9BRK0 252 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 ARHGAP39Q9C0H5 1083 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 PAPOLBQ9NRJ5 636 aaKnown RBP3.54□□□□□ -1.84
SNHG1-202ENST00000535689 RNF146Q9NTX7 359 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 IRAK4Q9NWZ3 460 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 ASIC5Q9NY37 505 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 THEGQ9P2T0 379 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 ZNF70Q9UC06 446 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-202ENST00000535689 KCND3Q9UK17 655 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 DTX4Q9Y2E6 619 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 SLC4A4Q9Y6R1 1079 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 BDP1A6H8Y1 2624 aa3.54□□□□□ -1.84
SNHG1-202ENST00000535689 ITIH6Q6UXX5 1313 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 CLSPNQ9HAW4 1339 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 A0A1B0GVC2 190 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 CLRN2A0PK11 232 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 GAGE10A6NGK3 116 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 FAM90A20PA6NIJ5 464 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 AGAP5A6NIR3 686 aa3.53□□□□□ -1.84
SNHG1-202ENST00000535689 KCNJ18B7U540 433 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms