RNA–Protein interactions for RNA: ENST00000535174.5

DDB1-205, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-205ENST00000535174 GALNT2Q10471 571 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 ZNF234Q14588 700 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 MS4A13Q5J8X5 152 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 RNASEH2BQ5TBB1 312 aaKnown RBP17.33■□□□□ 0.36
DDB1-205ENST00000535174 PIK3R6Q5UE93 754 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 SERPINA13PQ6UXR4 307 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 LRRC49Q8IUZ0 686 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 ZNF683Q8IZ20 524 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 ZCCHC9Q8N567 271 aaKnown RBP17.33■□□□□ 0.36
DDB1-205ENST00000535174 HTR3CQ8WXA8 447 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 PRCCQ92733 491 aaPredicted RBP17.33■□□□□ 0.36
DDB1-205ENST00000535174 HDAC11Q96DB2 347 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 SIPA1Q96FS4 1042 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 TOE1Q96GM8 510 aaKnown RBP17.33■□□□□ 0.36
DDB1-205ENST00000535174 ZNF419Q96HQ0 510 aaPredicted RBP17.33■□□□□ 0.36
DDB1-205ENST00000535174 GPR174Q9BXC1 333 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 MKRN2Q9H000 416 aaKnown RBP17.33■□□□□ 0.36
DDB1-205ENST00000535174 ELOVL2Q9NXB9 296 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 FAM53CQ9NYF3 392 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 MFHAS1Q9Y4C4 1052 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 FARP1Q9Y4F1 1045 aaPredicted RBP17.33■□□□□ 0.36
DDB1-205ENST00000535174 SNX10Q9Y5X0 201 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 NYNRINQ9P2P1 1898 aaKnown RBP17.33■□□□□ 0.36
DDB1-205ENST00000535174 ZFHX4Q86UP3 3567 aa17.33■□□□□ 0.36
DDB1-205ENST00000535174 UPK3BL1B0FP48 263 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 UPK3BL2E5RIL1 263 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 HYAL3O43820 417 aaPredicted RBP17.32■□□□□ 0.36
DDB1-205ENST00000535174 TSPAN3O60637 253 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 RHOQP17081 205 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 MAOBP27338 520 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 PPIDQ08752 370 aaKnown RBP17.32■□□□□ 0.36
DDB1-205ENST00000535174 AUHQ13825 339 aaKnown RBP17.32■□□□□ 0.36
DDB1-205ENST00000535174 MPPE1Q53F39 396 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 ARTNQ5T4W7 220 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 RWDD4Q6NW29 188 aaKnown RBP17.32■□□□□ 0.36
DDB1-205ENST00000535174 TRMT10CQ7L0Y3 403 aaKnown RBP17.32■□□□□ 0.36
DDB1-205ENST00000535174 PIP4P1Q86T03 277 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 PRUNE1Q86TP1 453 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 TMPRSS6Q8IU80 811 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 RELL1Q8IUW5 271 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 RTL3Q8N8U3 475 aaKnown RBP17.32■□□□□ 0.36
DDB1-205ENST00000535174 TSEN2Q8NCE0 465 aaKnown RBP17.32■□□□□ 0.36
DDB1-205ENST00000535174 SLC2A11Q9BYW1 496 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 FRMD8Q9BZ67 464 aaPredicted RBP17.32■□□□□ 0.36
DDB1-205ENST00000535174 ZYG11BQ9C0D3 744 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 MIR1-1HGQ9H1L0 117 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 C10orf88Q9H8K7 445 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 USP36Q9P275 1121 aaKnown RBP17.32■□□□□ 0.36
DDB1-205ENST00000535174 ZMIZ1Q9ULJ6 1067 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 WASF3Q9UPY6 502 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 GON4LQ3T8J9 2241 aa17.32■□□□□ 0.36
DDB1-205ENST00000535174 GOLGA6BA6NDN3 693 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 DRGXA6NNA5 263 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 LATS1O95835 1130 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 PRKCHP24723 683 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 HSD17B3P37058 310 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 MAGEA6P43360 314 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 SLC11A2P49281 568 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 PMS2P54278 862 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 LRIG3Q6UXM1 1119 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 PPP1R21Q6ZMI0 780 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 METTL3Q86U44 580 aaKnown RBP17.31■□□□□ 0.36
DDB1-205ENST00000535174 IQCKQ8N0W5 287 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 NPWQ8N729 165 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 SORCS1Q8WY21 1168 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 CPT1BQ92523 772 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 SPATA13Q96N96 652 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 TSGA13Q96PP4 275 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 VAT1Q99536 393 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 PRMT1Q99873 361 aaKnown RBP17.31■□□□□ 0.36
DDB1-205ENST00000535174 KLC2Q9H0B6 622 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 PABPC3Q9H361 631 aaKnown RBP17.31■□□□□ 0.36
DDB1-205ENST00000535174 DNAAF2Q9NVR5 837 aaKnown RBP17.31■□□□□ 0.36
DDB1-205ENST00000535174 WSB2Q9NYS7 404 aaPredicted RBP17.31■□□□□ 0.36
DDB1-205ENST00000535174 XPO7Q9UIA9 1087 aaKnown RBP17.31■□□□□ 0.36
DDB1-205ENST00000535174 CLEC4EQ9ULY5 219 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 CKAP5Q14008 2032 aa17.31■□□□□ 0.36
DDB1-205ENST00000535174 TMEM8BA6NDV4 472 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 EIF3HO15372 352 aaKnown RBP eCLIP17.3■□□□□ 0.36
DDB1-205ENST00000535174 ACSL4O60488 711 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 MAP3K6O95382 1288 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 HOXD9P28356 352 aaPredicted RBP17.3■□□□□ 0.36
DDB1-205ENST00000535174 OXTRP30559 389 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 GGCXP38435 758 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 GARSP41250 739 aaKnown RBP17.3■□□□□ 0.36
DDB1-205ENST00000535174 TPMTP51580 245 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 AP1B1Q10567 949 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 GRIK2Q13002 908 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 CBLBQ13191 982 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 ENPP2Q13822 863 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 KCTD19Q17RG1 926 aaPredicted RBP17.3■□□□□ 0.36
DDB1-205ENST00000535174 C5orf22Q49AR2 442 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 FNDC3BQ53EP0 1204 aaKnown RBP17.3■□□□□ 0.36
DDB1-205ENST00000535174 AFMIDQ63HM1 303 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 C14orf80Q86SX3 495 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 FAM217AQ8IXS0 508 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 NAT8LQ8N9F0 302 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 CCNYQ8ND76 341 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 SNX19Q92543 992 aa17.3■□□□□ 0.36
DDB1-205ENST00000535174 RUFY1Q96T51 708 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms