RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 CCSAPQ6IQ19 270 aaPredicted RBP4.46□□□□□ -1.7
ITGB1-219ENST00000534049 CCBE1Q6UXH8 406 aaPredicted RBP4.46□□□□□ -1.7
ITGB1-219ENST00000534049 MAATS1Q7Z4T9 603 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 UEVLDQ8IX04 471 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 SLC7A5P1Q8MH63 180 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 GDAP1Q8TB36 358 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 IFT81Q8WYA0 676 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 IRGQQ8WZA9 623 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 CDKL2Q92772 493 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 OPTNQ96CV9 577 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 HVCN1Q96D96 273 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 TBC1D31Q96DN5 1066 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 SNF8Q96H20 258 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 VCPIP1Q96JH7 1222 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 RPGRIP1Q96KN7 1286 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 TRAPPC9Q96Q05 1148 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 WDR24Q96S15 920 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 TUBB2BQ9BVA1 445 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 FUT8Q9BYC5 575 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 VIPAS39Q9H9C1 493 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 VPS45Q9NRW7 570 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 CHPF2Q9P2E5 772 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 ORC3Q9UBD5 711 aaPredicted RBP4.46□□□□□ -1.7
ITGB1-219ENST00000534049 PYCARDQ9ULZ3 195 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 TRAF3IP3Q9Y228 551 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 PCDHB2Q9Y5E7 798 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 HS3ST3B1Q9Y662 390 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 BZW2Q9Y6E2 419 aaKnown RBP4.46□□□□□ -1.7
ITGB1-219ENST00000534049 CAPN7Q9Y6W3 813 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 NUP188Q5SRE5 1749 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 PARP4Q9UKK3 1724 aaKnown RBP4.46□□□□□ -1.7
ITGB1-219ENST00000534049 TTC41PQ6P2S7 1318 aa4.46□□□□□ -1.7
ITGB1-219ENST00000534049 CD163L1Q9NR16 1453 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 IQANK1A0A1B0GTG1 560 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 E9PMD0 336 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 BOLA2-SMG1P6H3BVE0 249 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 ADAM10O14672 748 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 CA12O43570 354 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 PRAMEF2O60811 474 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 SHOX2O60902 331 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 STAMBPO95630 424 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 PLAUP00749 431 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 SNHG28P0DPA3 235 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 HOXB6P17509 224 aaKnown RBP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 ALDH3A1P30838 453 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 KIF5BP33176 963 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 CSTF2P33240 577 aaKnown RBP eCLIP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 GNL1P36915 607 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 CPA2P48052 419 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 PEX5P50542 639 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 SULT2A1Q06520 285 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 DMPKQ09013 629 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 BLMHQ13867 455 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 COG2Q14746 738 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 KPNB1Q14974 876 aaKnown RBP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 SPCS2Q15005 226 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 SAFBQ15424 915 aaKnown RBP eCLIP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 NDUFA5Q16718 116 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 CMPK2Q5EBM0 449 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 CCDC183Q5T5S1 534 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 CFAP58Q5T655 872 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 ARMC3Q5W041 872 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 ABLIM2Q6H8Q1 611 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 NCAPH2Q6IBW4 605 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 GRHL2Q6ISB3 625 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 CCDC121Q6ZUS5 278 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 PIM3Q86V86 326 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 HOOK3Q86VS8 718 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 FAM186BQ8IYM0 893 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 CCDC33Q8N5R6 958 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 ESX1Q8N693 406 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 NRACQ8N912 160 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 ANKRD49Q8WVL7 239 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 C16orf45Q96MC5 204 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 NR1H4Q96RI1 486 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 CCT7Q99832 543 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 NUDT22Q9BRQ3 303 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 WACQ9BTA9 647 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 CCDC28BQ9BUN5 200 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 NAT10Q9H0A0 1025 aaKnown RBP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 ALDH8A1Q9H2A2 487 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 EBF2Q9HAK2 575 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 CLK4Q9HAZ1 481 aaKnown RBP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 ERVK-5Q9HDB9 667 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 DMAP1Q9NPF5 467 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 FKBP14Q9NWM8 211 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 MYO1AQ9UBC5 1043 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 STK39Q9UEW8 545 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 MTUS1Q9ULD2 1270 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 TTC7AQ9ULT0 858 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 MON2Q7Z3U7 1717 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 ABCC6O95255 1503 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 CPSF1Q10570 1443 aaKnown RBP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 RGPD3A6NKT7 1758 aaPredicted RBP4.45□□□□□ -1.7
ITGB1-219ENST00000534049 RGPD4Q7Z3J3 1758 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 GAKO14976 1311 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 SPATA31A5Q5VU36 1347 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 PHLPP2Q6ZVD8 1323 aa4.45□□□□□ -1.7
ITGB1-219ENST00000534049 SPATA31A7Q8IWB4 1347 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms